Lee, Yiu Fai

Liu, Yang

Ng, Michael K

BMC Bioinformatics

English

PubMed

Yang Liu

Yiu Lee

Michael K Ng

Crossref

SNP and gene networks construction and analysis from classification of copy number variations data

Springer - Publisher Connector

Altshuler D: Integrated genotype calling and association analysis of SNPs, common copy number polymorphisms and rare CNVs. Nature Genetics

Altshuler DM: Common deletion polymorphisms in the human genome. Nature Genetics

An Integrated View of Copy Number and Allelic Alterations in the Cancer Genome Using Single Nucleotide Polymorphism Arrays. Cancer Research

Array Comparative Genome Hybridization for Tumor Classification and Gene Discovery in Mouse Models of Malignant Melanoma. Cancer Res

Asgharzadeh S: Sparse representation and Bayesian detection of genome copy number alterations from microarray data. Bioinformatics

Barillot E: Analysis of array CGH data: from signal ratio to gain and loss of DNA regions. Bioinformatics

C: dChipSNP: Significance Curve and Clustering of SNP-Array-Based Loss-ofHeterozygosity Data. Bioinformatics

Classification of human cancers based on DNA copy number amplification modeling.

Classifying Melanocytic Tumors Based on DNA Copy Number Changes.

CNV: An integrated hidden Markov model designed for high-resolution copy number variation detection in whole-genome SNP genotyping data. Genome Research

Copy number variation: New insights in genome diversity. Genome Research

Detection of large-scale variation in the human genome. Nature Genetics

DG: High resolution analysis of DNA copy number variation using comparative genomic hybridization to microarrays. Nature Genetics

F: Optimizing copy number variation analysis using genome-wide short sequence oligonucleotide arrays. Nucleic Acids Research

Furcht LT: Molecular mechanisms in basement membrane complications of diabetes.

Gene ontology: tool for the unification of biology.

Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls. Nature

Global variation in copy number in the human genome. Nature

Ideker T: Cytoscape: a software environment for integrated models of biomolecular interaction networks. Genome Res

JK: A highresolution survey of deletion polymorphism in the human genome. Nature Genetics

K: A Bayesian segmentation approach to ascertain copy number variations at the population level. Bioinformatics

KL: Highresolution genomic profiling of chromosomal aberrations using Infinium whole-genome genotyping. Genome Res

Korenberg JR: DSCAM: a novel member of the immunoglobulin superfamily maps in a Down syndrome region and is involved in the development of the nervous system. Human Molecular Genetics

Korenberg JR: The genetic architecture of Down syndrome phenotypes revealed by high-resolution analysis of human segmental trisomies. PNAS

Large-Scale Copy Number Polymorphism in the Human Genome. Science

Lemkes HH: Mitochondrial Diabetes: Molecular Mechanisms and Clinical Presentation. Diabetes

Lingjaerde OC: Comparison of the Agilent, ROMA/NimbleGen and Illumina platforms for classification of copy number alterations in human breast tumors.

Machine learning method applied to DNA microarray data can improve the diagnosis of cancer.

Parving H: Mannose-Binding Lectin as a Predictor of Microalbuminuria in Type 1 Diabetes. Diabetes

Pinkel D: Comparative genomic hybridization for molecular cytogenetic analysis of solid tumors. Science

QuantiSNP: an Objective Bayes HiddenMarkov Model to detect and accurately map copy number variation using SNP genotyping data. Nucleic Acids Research

S: A Robust Algorithm for Copy Number Detection Using High-Density Oligonucleotide Single Nucleotide Polymorphism Genotyping Arrays. Cancer Res

Shapero MH: Whole genome DNA copy number changes identified by high density oligonucleotide arrays. Hum Genomics

SW: Structural variation in the human genome. Nature Reviews Genetics

T: A new measure for functional similarity of gene products based on Gene Ontology.

Tibshirani R: A method for calling gains and losses in array CGH data. Biostatistics

Wang XJ: GOEAST: a web-based software toolkit for Gene Ontology enrichment analysis.

Wong WH: DNA-Chip Analyzer (dChip). In The analysis of gene expression data: methods and software.

YP: A Statistical Change Point Model Approach for the Detection of

http://www.pubmedcentral.nih.gov/articlerender.fcgi?artid=3226254

SNP and gene networks construction and analysis from classification of copy number variations data

Abstract

Similar works

Full text

Available Versions

Crossref

Springer - Publisher Connector

Springer - Publisher Connector