Stramenopile multigene tree dataset

Abstract

Supporting data regarding the construction of a 63-gene concatenated tree of all photosynthetic stramenopiles. This dataset includes: - detailed BLAST outputs for the complete protein-coding component of Phaeodactylum tricornutum, searched against complete libraries from each species incorporated into the alignment - fasta format clusters and single-gene neighbour-joining trees for 65 proteins with broad (>90%) ochrophyte conservation - a concatenated 26693 aa alignment of 63 proteins for which ochrophyte sequences were verified to be monophyletic, and eight modified alignments from which fast-evolving site categories were serially deducted. A "readme" file in the main directory provides additional details as deemed appropriate.EMBO [1124/2014

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