Melanin plays a crucial role as a pigment all through the animal kingdom. Being a macromolecule just on the divide between an ordered crystalline or a purely amorphous form melanin has proven a challenge to structure-function analysis. Melanin assembles from small molecules much like a jigsaw and much like in a jigsaw the fine detail quickly vanishes in the overall picture. With Melanin being first and foremost a photo-active molecule we focus on spectral properties for the characterization of its structure using linked measurements of excitation and emission to identify ‘areas of interest’ in the Excitation-Emission Matrix (EEM). We then probe for characteristic fluorescence lifetimes in the identified areas to track melanin building blocks through the formation pathway

Sutter, Jens U

Yip, Philip

University of Strathclyde Institutional Repository

Yip, Philip and Sutter, Jens U (2017) Mapping the formation of eumelanin using coupled measurements. In: FluoroFest, 2017-04-24 - 2017-04-26, Village Hotel Club. , This version is available at https://strathprints.strath.ac.uk/64917/Strathprints is  designed  to  allow  users  to  access  the  research  output  of  the  University  of Strathclyde. Unless otherwise explicitly stated on the manuscript, Copyright © and Moral Rights for the papers on this site are retained by the individual authors and/or other copyright owners. Please check the manuscript for details of any other licences that may have been applied. You may  not  engage  in  further  distribution  of  the  material  for  any  profitmaking  activities  or  any commercial gain. You may freely distribute both the url (https://strathprints.strath.ac.uk/) and the content of this paper for research or private study, educational, or not-for-profit purposes without prior permission or charge. Any correspondence concerning this service should be sent to the Strathprints administrator: strathprints@strath.ac.ukThe Strathprints institutional repository (https://strathprints.strath.ac.uk) is a digital archive of University of Strathclyde research outputs. It has been developed to disseminate open access research outputs, expose data about those outputs, and enable the management and persistent access to Strathclyde's intellectual output.Mapping the Formation of Eumelaninusing Coupled Measurements2. A finely balanced System:Eumelanin derived from L-Dopa3. Joining Parameters: Excitation-Emission Matrices (EEM)4. Areas of Interest:The Building Sites of Melanin5. Tracking Pieces of the Puzzle:Characteristic Lifetimes in the EEM6. Closer to Nature:Influence of Effectors on Melanin Structure1. Emulating Nature:Making Melanin in the LabConclusions & OutlookThe work presented here is kindly supported by theThe Scottish Universities Physics AlliancePhilip Yip1,2 & Jens U Sutter2*1 Horiba IBH Ltd. 133 Finnieston Street, Glasgow G3 8HB, Scotland, UK2 Photophysics Group, Department of Physics, John Anderson Building, University of Strathclyde, Glasgow, G4 0NG, Scotland, UK* jens.sutter@strath.ac.ukReferences:[1] Ito S. $FKHPLVW¶VYLHZRIPHODQRJHQHVLVPigment Cell Research 16 (3), 230, 2003[2] Sutter JU & Birch DJS Metal Ion Influence on Eumelanin Fluorescence and Structure Methods and Applications in Fluorescence 2 024005 2014[3] &RUDQL$+XLMVHU$,DGRQLVL$3H]]HOOD$6XQGVWU|P9	G¶,VFKLD0Bottom-Up Approach to Eumelanin Photoprotection: Emission Dynamics in Parallel Sets of Water-Soluble 5,6-Dihydroxy-Indole Based Model Systems. Journal of Physical Chemistry B 116(44), 13151-13158, 2012[4] &RUDQL$3H]]HOOD$3DVFKHU7*XVWDYVRQ70DUNRYLWVL'+XLMVHU$G¶,VFKLD0	6XQGVWU|P9Excited-State Proton-Transfer Processes of DHICA Resolved: From Sub-Picoseconds to Nanoseconds Journal of Physical Chemistry Letters 4 1383-1388, 2013[5] Birch DJS & Sutter JU The Effect of Copper on Eumelanin Photophysics and Morphology , Proceeding of SPIE 8587 858705 2013AbstractMelanin plays a crucial role as a pigment all through the animal kingdom. Being amacromolecule just on the divide between an ordered crystalline or a purely amorphous formmelanin has proven a challenge to structure-function analysis.Melanin assembles from small molecules much like a jigsaw and much like in a jigsaw the finedetail quickly vanishes in the overall picture. With Melanin being first and foremost a photo-active molecule we focus on spectral properties for the characterization of its structure usinglinked measurements of excitation and emission to identify µDUHDV of LQWHUHVW¶ in the Excitation-Emission Matrix (EEM). We then probe for characteristic fluorescence lifetimes in the identifiedareas to track melanin building blocks through the formation pathway.A photo-active molecule like melanin can be characterized through a wide range ofparameters: its absorbance (key to its purpose as our µQDWXUDO VXQVFUHHQ¶ its fluorescence;(small but not at all negligible), its excitation, the size of its particles, its conductivity and manymore.Tacking the evolution of EEMs during the formation process of melaninallows to identify specific sites where the absorption generates significantfluorescence emission. Some of these area show a transient charactersuggesting that fluorescent structures are later transformed or integratedinto non-fluorescent parts of the molecule.Sample,  Fl. Wavelength/nm 1W /ns 1 / %B  2W /ns 2 / %B  3W /ns 3 / %B   no Cu2+, 480 4.88 r 0.12 18 1.01 r 0.04 23 0.03 r 0.05 59 no Cu2+, 530 4.87 r 0.17 17 1.03 r 0.17 26 0.24 r 0.01 57 4 PM Cu2+, 480 6.33 r 0.03 100     4 PM Cu2+, 530 6.24 r 0.03 81 1.21 r 0.11 19    00.20.40.60.811.21.41.61.82250 300 350 400 450 50000.20.40.60.811.21.41.61.82250 300 350 400 450 500The formation of melanin can be easily tracked by recording the evolution of its characteristicabsorption spectrum. Taking absorbance scans over time reveals several isosbestic points in thespectrum. While an isosbestic point is not in itself an indication of the conversion of one speciesinto another or of an equilibrium between two species it does show that the stoichiometry (therelative quantity of reactants and products) remains constant.With the melanin absorption spectrashowing several isosbestic points wehave clear indication of a highlyregulated, highly interlinked formationnetwork [2].A small change in an externalparameter ± here the pH ± is sufficientto blur one isosbestic point (Figure)indicating a change in the chemicalcomposition.Measuring melanin parametersseparately often leaves difficulties incomparing and linking findings. Togain control over this plethora ofparameters we conducted joined-measurements recording melanincharacteristics simultaneously.An Excitation Emission Matrix (EEM)provides a highly detailed µVSHFWUDOILQJHUSULQW¶ of the melanin.Melanin offers great opportunities as a bio-engineering tool to build bio circuitry or as a immuno-neutral cover for implants or nano-medical compounds. To fully exploit these opportunities we needgreater understanding of melanin formation. Tracking joined characteristic parameters during theformation process of complex macro-molecules opens opportunities to identify and trace separatebuilding blocks of the molecule.Excellent work has been done to characterizesingle building blocks of melanin [3,4]. We canuse these characterisations to identifycomponents of melanin present during theformation process. Tracking the fluorescencelifetimes in Region µ%¶ reveals threecharacteristic decay times, two showing atransient nature and a third component risingover the course of melanin formation. Thecomponent with the lifetime of 1.79 ns is likelyto be 5,6-Dihydroxy-Indole (DHI) [3].DHICA DHICA   DHIUsing EEMs we identify differences between lab generated and naturally occurring melanin and showhow the addition of the micro nutrients can lead to a melanin closer in characteristics to the naturalform (Figure below).The production of eumelanin in the lab is a well established technique yielding highly reproducibleresults. Alas melanin extracted from natural sources does show small but intriguing differences to labgenerated melanin. The addition of micro-nutrients like transition metal ions to the reaction can alterthe characteristics of the melanin generated [5] (Figure below).In the human body eumelanin derives from theamino acid Tyrosine which is then converted byenzymatic action and oxidisation into the moleculeL-Dopa to start the melanin formation pathway.Starting the reaction directly from L-Dopa hasproven to be a realistic method to investigatemelanin in laboratory conditions [1].Figure 2: Evolution of the absorption spectrum of eumelaninShown are the absorption spectra of de novo forming melanin recordedin 5 minute intervals at pH 8 (left) and pH 8.3 (right). The pH changeleads to the blurring of the isosbestic point at 320nm emission.Figure 5: Evolution of lifetimesTracking the evolution of fluorescentlifetimes in areas of interest allows topinpoint the presence of characteristicmelanin components.Figure 1: The melanin formation pathwaysMelanin is generated through a complex network of reaction-pathwaysleading to eumelanin (black-brown pigment) and pheomelanin (reddish).By adding or omitting Cysteine and the enzyme Tyrosinase we cangenerate pure eumelanin or a mixture of both melanin types.Figure 4: Areas of interest in the excitation-emission matrixRecording EEMs at different times during the melanin formation process reveals regions of high excitationand emission. We observe a characteristic area µ$¶ where the initial L-Dopa molecule absorbs andfluoresces. Areas µ%¶ and µ&¶ show a longer joint excitation wavelength around 325nm and emission at415nm and 535nm respectively.Figure 6a: Micro-nutrients influence eumelanin structureAdding copper to de novo formingmelanin simplifies the fluorescencedecay of melanin emitting at 480nmand 530nm (1) [5].Variations in the pH as well asaddition of transition metal ionsleads to striking differences inmelanin colour (2).Figure 6b: The effect of micro-nutrients on EEMsComparing the EEM of laboratorymelanin (1) with that of naturalsepia melanin (2) we findcharacteristic differences like ashort wavelength area present innatural melanin but not in labmelanin (ex: 275nm, em:340nm).Addition of 10 PM copper ionspartially restores this area (3).Figure 3: The EEM of synthesised eumelaninJoined recording of fluorescence excitation and emission yieldsa characteristic µODQGVFDSH¶ of melanin fluorescence: a uniquespectral fingerprint.pH 9 & 10          pH 9 & 10       pH 10  pH 10no ions               Cu2+ Ni2+ K+300 400 500 600 700300400500600340275020000004000000   Scale = 36020000004000000  Scale = 36300 400 500 600 700300400500600340275020000004000000   Scale = 36020000004000000  Scale = 36300 400 500 600 700300400500600340275020000004000000   Scale = 36020000004000000  Scale = 36unmodified melanin melanin from Sepia Officinalis melanin generated with Cu2+

Mapping the formation of eumelanin using coupled measurements

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Mapping the formation of eumelanin using coupled measurements

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