Anderson, Olin D

Dvorak, Jan

Gu, Yong Qiang

Hane, Dave

Huo, Naxin

Lazo, Gerard R

Luo, Ming-cheng

Ma, Yaqin

You, Frank M

BMC Bioinformatics

English

PubMed

Frank M You

Naxin Huo

Yong Gu

Ming-cheng Luo

Yaqin Ma

Dave Hane

Gerard R Lazo

Jan Dvorak

Olin D Anderson

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BatchPrimer3: A high throughput web application for PCR and sequencing primer design

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A unified view of polymer, dumbbell, and oligonucleotide DNA nearest-neighbor thermodynamics.

AF: Analysis of any point mutation in DNA. The amplification refractory mutation system (ARMS). Nucleic Acids Res

Allele specific amplification by tetra-primer PCR. Nucleic Acids Res

ARMS analysis of point mutations.

Ashikawa I: Development of PCR-based allele-specific and InDel marker sets for nine rice blast resistance genes. Theor Appl Genet

Aurrekoetxea I, Ruiz del Agua A, Ruiz-Larrea MB: Detection of catechol-O-methyltransferase Val158Met polymorphism by a simple one-step tetra-primer amplification refractory mutation system-PCR. Mol Cell Probes

Ausubel FM: A simple procedure for the analysis of single nucleotide polymorphisms facilitates map-based cloning in Arabidopsis. Plant Physiol

Bioinformatics tools and guideline for PCR primer design.

BS: A chromosome bin map of 16,000 expressed sequence tag loci and distribution of genes among the three genomes of polyploid wheat. Genetics

Carracedo A: SNPs in forensic genetics: a review on SNP typing methodologies. Forensic Sci Int

Computational and experimental analysis of microsatellites in rice (Oryza sativa L.): frequency, length variation, transposon associations, and genetic marker potential. Genome Res

D: SSRPrimer and SSR Taxonomy Tree: Biome SSR discovery. Nucleic Acids Res

Day IN: An efficient procedure for genotyping single nucleotide polymorphisms. Nucleic Acids Res

Dehio C: PrimeArray: genomescale primer design for DNA-microarray construction. Bioinformatics

Dveksler GS: General concepts fpr PCR primer design.

Enhancements and modifications of primer design program Primer3. Bioinformatics

Fluorescence polarization in homogeneous nucleic acid analysis. Genome Res

Genic microsatellite markers in plants: features and applications. Trends Biotechnol

Genome-specific primer sets for starch biosynthesis genes in wheat. Theor Appl Genet

Genotyping single nucleotide polymorphisms in barley by tetra-primer ARMS-PCR. Genome

GQ: Development of a rapid mismatch PCR method using tetra-primer ARMS for detection of BMPR-IB gene mutation in sheep. Yi Chuan

Heutink P: The PCR suite. Bioinformatics

Hinoda Y: Evaluation of a new efficient procedure for single-nucleotide polymorphism genotyping: tetra-primer amplification refractory mutation system-polymerase chain reaction. Clin Chem Lab Med

Karrow NA: Identification of single nucleotide polymorphisms in the bovine CCL2, IL8, CCR2 and IL8RA genes and their association with health and production in Canadian Holsteins. Anim Genet

KR: Identification of SNPs and development of allele-specific PCR markers for gamma-gliadin alleles in Triticum aestivum. Theor Appl Genet

LA: Recent developments in primer design for DNA polymorphism and mRNA profiling in higher plants. Plant Methods

Leunissen JA: Primer3Plus, an enhanced web interface to

MF: Expeditor: a pipeline for designing primers using human gene structure and livestock animal EST information.

OD: Construction and characterization of two BAC libraries from Brachypodium distachyon, a new model for grass genomics. Genome

Polymorphism revalued by simple sequence repeats. Trends Plant Sci

Predicting DNA duplex stability from the base sequence. Proc Natl Acad Sci USA

RB: Allele-specific polymerase chain reaction. Methods Enzymol

RJ: Robust allele-specific polymerase chain reaction markers developed for single nucleotide polymorphisms in expressed barley sequences. Theor Appl Genet

Skaletsky HJ: Primer3 on the WWW for general users and for biologist programmers.

SNPbox: a modular software package for large-scale primer design. Bioinformatics

SSR screening and primers in Brachypodium BAC

Universal SNP genotyping assay with fluorescence polarization detection. Biotechniques

Vogel JP: Development of genetic and genomic research resources for Brachypodium distachyon, a new model system for grass crop research. Crop Sci

Wheat SNP markers: development, mapping and deployment.

YQ: The nuclear genome of Brachypodium distachyon: analysis of BAC end sequences. Funct Integr Genomics

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BatchPrimer3: A high throughput web application for PCR and sequencing primer design

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