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AFLP analysis of arbuscular mycorrhizal fungi in roots of Prunus mume

Abstract

第一作者: 蔡邦平,博士,副研究员。主要研究方向: 园林植物与观赏园艺、植物菌根。电话: 0592--2039576 Email : cbangping@ 163.com 地址: 361003 福建省厦门市思明区虎园路25 号厦门市园林植物园。[中文文摘]为了解决梅根系共生的丛枝菌根(AM)真菌难以应用形态学鉴定的问题,以巢式PCR的AFLP方法研究梅根系AM真菌DNA多态性。试验采集梅花期的根系样品,应用改良CTAB法提取总DNA,经纯化处理后,应用巢式PCR扩增根系AM真菌基因片段,进行AFLP分析。结果表明,18个梅品种的30个根系样品中,仅有8个样品经巢式PCR后获得纯化的DNA片段,占试验样品数的26.7%;8个样品共得到指纹图谱带24条,各样品平均多态性位点数为3.0个,Nei’s基因多样性为0.4097±0.0848,Shannon信息指数为0.5968±0.0955;利用Nei’s遗传相似性系数聚类,梅品种根系内AMF基因组DNA的聚类类别与梅"品种群"这一分类级别无相关性。该试验为植物根系共生AM真菌DNA多态性研究提供了一种简便的技术。[英文文摘]DNA polymorphism of arbuscular mycorrhizal fungi (AMF) was analyzed through the method of DNA amplification by nested PCR based on AFLP marker,in order to solve the difficulty of identifying the species of AMF associated with mei flowers (Prunus mume Sieb.et Zucc.).A total of 30 root samples from 18 mei cultivars were collected in the flowering phase from Wuhan Mei Garden as experimental materials.The results show that the purified DNA can be extracted only from eight root samples that account for 26.7% of total root samples.Totally 24 polymorphic loci were obtained from eight sample roots,averaging 3. 0 loci for each sample.The average genetic identity was 0. 409 7 ±0. 084 8,and the Shannon information index was 0. 596 8 ± 0. 095 5. The clustered groups of AMF DNA by AFLP marker from different cultivars were not identical with cultivar groups of P.mume.The results indicate that the AFLP marker technology is a brief and effective method to study the DNA polymorphism for the AMF in the roots of a plant.教育部科学技术研究重点项目(104034);; 国家自然科学基金项目(30670047);; 厦门市科技计划项目(3502Z20072010、3502Z20112004

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