We give an overview of the work done with the Laboratoire National de
M\'etrologie et d'Essais-Syst\`emes de R\'ef\'erence Temps-Espace (LNE-SYRTE)
fountain ensemble during the last five years. After a description of the clock
ensemble, comprising three fountains, FO1, FO2, and FOM, and the newest
developments, we review recent studies of several systematic frequency shifts.
This includes the distributed cavity phase shift, which we evaluate for the FO1
and FOM fountains, applying the techniques of our recent work on FO2. We also
report calculations of the microwave lensing frequency shift for the three
fountains, review the status of the blackbody radiation shift, and summarize
recent experimental work to control microwave leakage and spurious phase
perturbations. We give current accuracy budgets. We also describe several
applications in time and frequency metrology: fountain comparisons,
calibrations of the international atomic time, secondary representation of the
SI second based on the 87Rb hyperfine frequency, absolute measurements of
optical frequencies, tests of the T2L2 satellite laser link, and review
fundamental physics applications of the LNE-SYRTE fountain ensemble. Finally,
we give a summary of the tests of the PHARAO cold atom space clock performed
using the FOM transportable fountain.Comment: 19 pages, 12 figures, 5 tables, 126 reference