Characterization of cobalmin-independent methionine synthase from Candida albicans and Saccharomyces cerevisiae

Abstract

Methionine synthases are folate-dependent enzymes that catalyze the transfer of a methyl group from 5-methyltetrahydropteroylpolyglutamate (CH3– H4PteGlun), also called 5-methyltetrahydrofolate, to L-homocysteine to form L-methionine. There are two major classes of methionine synthases, the cobalamin-dependent and the cobalamin-independent methionine synthases. The cobalamin-dependent methionine synthase is a very large, 140 kDa protein, and uses cobalamin to aid in the transfer of the methyl group from 5- CH3–H4PteGlun to homocysteine. Only organisms that can synthesize or obtain cobalamin, such as mammals, use cobalamin-dependent methionine synthase. Organisms that cannot obtain or synthesize cobalamin, such as fungi, use the cobalamin-independent methionine synthases, and some bacteria such as E. coli use enzymes from both classes. Proteins from the cobalamin-independent class have a molecular weight of 86 kDa, and have no amino acid sequence homology to the cobalamin-dependent enzymes. These enzymes are zinc dependent, and kinetic analyses of the E. coli cobalamin-independent methionine synthase (MetEp) reveal that it will only bind polyglutamated forms of 5-CH3– H4PteGlun. Methionine synthases from fungi are not well characterized. They may be interesting anti-fungal drug targets because of the mechanistic differences between them and the cobalamin-dependent forms present in humans. C. albicans resides in the normal flora of the human body. However, it is able to cause infection in immunocompromised patients. In the past two decades, C. albicans has become one of the most common opportunistic pathogens, particularly in hospitals. Increasing drug resistance to present drugs, and severe side effects results in the constant search for new drug targets to create better and more effective therapies. The work presented here investigates the cobalamin-independent methionine synthase from C. albicans (CaMet6p) and from S. cerevisiae (ScMet6p). Substrate specificity for both enzymes was explored through kinetic analyses, and a strategy was implemented to study important active site residues by site-directed mutagenesis. A conditional cobalamin-independent methionine synthase (CaMET6) mutant in C. albicans was constructed, using the PCR-based gene disruption method, to assess the viability of the resulting null mutant strain. The results from these experiments have provided new insights into enzyme function, and support the study of CaMet6p as an anti-fungal drug target.Chemistry and BiochemistryChemistr

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