The point placement problem on a line improved bounds for pairwise distance queries

Abstract

This research is supported by the RGC grant HKU7119/05E.In this paper, we study the adaptive version of the point placement problem on a line, which is motivated by a DNA mapping problem. To identify the relative positions of n distinct points on a straight line, we are allowed to ask queries of pairwise distances of the points in rounds. The problem is to find the number of queries required to determine a unique solution for the positions of the points up to translation and reflection. We improved the bounds for several cases. We show that An/3 + O(√n) queries are sufficient for the case of two rounds while the best known result was 3n/2 queries. For unlimited number of rounds, the best result was 4n/3 queries. We obtain a much better result of using 5n/4 + O(√n) queries with three rounds only. We also improved the lower bound of 30n/29 to 17n/16 for the case of two rounds. © Springer-Verlag Berlin Heidelberg 2007.link_to_subscribed_fulltex