We provide two ways to show that the R. Thompson group F has maximal
subgroups of infinite index which do not fix any number in the unit interval
under the natural action of F on (0,1), thus solving a problem by D.
Savchuk. The first way employs Jones' subgroup of the R. Thompson group F and
leads to an explicit finitely generated example. The second way employs
directed 2-complexes and 2-dimensional analogs of Stallings' core graphs, and
gives many implicit examples. We also show that F has a decreasing sequence
of finitely generated subgroups F>H1>H2>... such that ∩Hi={1} and
for every i there exist only finitely many subgroups of F containing Hi.Comment: 20 pages; v2: fixed some misprints, filled a gap in the proof of
Theorem 4.1, added Remark 4.1 that Homeo^+(R) and many subgrioups of that
group are quasi-residually finite; v3: Section 5 added, final version
accepted to Transactions of the AM