We discuss the notion of polarised isogenies of abelian varieties, that is,
isogenies which are compatible with given principal polarisations. This is
motivated by problems of unlikely intersections in Shimura varieties. Our aim
is to show that certain questions about polarised isogenies can be reduced to
questions about unpolarised isogenies or vice versa.
Our main theorem concerns abelian varieties B which are isogenous to a fixed
abelian variety A. It establishes the existence of a polarised isogeny A to B
whose degree is polynomially bounded in n, if there exist both an unpolarised
isogeny A to B of degree n and a polarised isogeny A to B of unknown degree. As
a further result, we prove that given any two principally polarised abelian
varieties related by an unpolarised isogeny, there exists a polarised isogeny
between their fourth powers.
The proofs of both theorems involve calculations in the endomorphism algebras
of the abelian varieties, using the Albert classification of these endomorphism
algebras and the classification of Hermitian forms over division algebras