Columns are described in the read_me file. See also the associated GitHub repository for the analysis pipeline: https://github.com/StefanoMammola/Mammola_et_al_ToL_research_interestN

Adamo, Martino

Antić, Dragan

Calevo, Jacopo

Cancellario, Tommaso

Cardoso, Pedro

Chamberlain, Dan

Chialva, Matteo

Correia, Ricardo A.

Durucan, Furkan

Fontaneto, Diego

Gonçalves, Duarte

Mammola, Stefano

Martínez, Alejandro

Rubio-López, Íñigo

Santini, Luca

Sousa, Ronaldo

Verdes, Aida

Villegas-Ríos, David

English

Columns are described in the read_me file.-- See also the associated GitHub repository for the analysis pipeline: https://github.com/StefanoMammola/Mammola_et_al_ToL_research_interestData for the paper https://doi.org/10.7554/eLife.88251.1N

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Explanation of columns in the database “SampleTREE_TraitCompiled.csv”In the database, “NA” denote missing data. 1) kingdom, phylum, class, order, family, genus, species,  species_name, author: Taxonomic information2) taxonID: Taxon ID in GBIF3) fossil_status: Was the extracted species a fossil. All “resampled” have been resampled4) uniqueness_family [Numeric; integer]: Number of species in the same family, based on GBIF backbone taxonomy5) uniqueness_genus [Numeric; integer] Number of congeneric species, based on GBIF backbone taxonomy6) size_m,  size_f, size_avg [Numeric; in millimeters]: Size of male and female and average male & female. 7) model_organism [Binary. 1 = Yes; 0 = No]: Is the species an established scientific model organism beyond ecology/evolution (e.g. Neurospora, Arabidopsis, Drosophila)? (Subjective assessment)8) harmful_to_human [Binary. 1 = Yes; 0 = No]: Is the species harmful to human in some way; e.g. pest, notorious alien species, potentially dangerous (lion, venomous spiders, etc.) (Subjective assessment)9) human_use [Binary. 1 = Yes; 0 = No]: Any commercial and or cultural use? e.g. used as pets, as food, in the zoo, for pharmaceutics. (Subjective assessment) IMPORTANT: for “Zoo” you can use this resource:1https://zooinstitutes.com/#10) domain [Categorical, One of = freshwater, marine, terrestrial]: If multiple domains apply, these are separated with a semicolon, e.g. “freshwater ; marine”11) reproductive_habitat. [Categorical. One of = multiple (4+ habitats), forest, shrubland, grassland, river, desert, lake, other wetlands, rocky areas, subterranean habitats, marine oceanic, marine coastal, deep ocean floor,  artificial, zoo/epiphytic or parasite; unknown] These general habitats are readapted from IUCN (https://www.iucnredlist.org/resources/habitat-classification-scheme). If multiple habitats apply, these are separated them with a semicolon, e.g. “shrubland ; grassland”.12) trophic_role [Categorical. One of = producer, primary consumer, secondary consumer, tertiary consumers, decomposer, parasite, unknown]: If a species changes trophic role during the life cycle, separate them with a semicolon, e.g. “parasite ; secondary consumer”.13) common_name [Binary. 1 = Yes; 0 = No]: Does the species has a popular name in English? 14) colorful [Binary. 1 = Yes; 0 = No]: Is the species bright-fully coloured? (Subjective assessment)15) color_blu [Binary. 1 = Yes; 0 = No]: Is the species bright blue coloured1 / has violet/blue/light blue markings? (Subjective assessment)16) color_red [Binary. 1 = Yes; 0 = No]: Is the species bright red/purple coloured / has red/purple markings? (Subjective assessment)217) mimetism [Binary. 1 = Yes; 0 = No]: Does the species present striking mimetic pattern(disruptive, aposematic, batesian)? We did not consider cryptic (Subjective assessment)18) photo_google [Binary. 1 = Yes; 0 = No]: Are there ‘popular’ photo of the species on Google? Photo of the species in the natural habitat or in captivity (do not consider photo published in scientific articles or museal specimens).19) CITES [Categorical.  1 = Yes; 0 = No]: Is the species listed in CITES?20) IUCN [Categorical]: One of = Not evaluated (NE); Extinct (EX); Critically Endangered (CR); Endangered (EN); Vulnerable (VU); Near Threatened (NT); Least Concern (LC); Data Deficient (DD)] Extinction risk sensu IUCN as of October 2020.21) mean_divergence_time_Mya , median_divergence_time_Mya [Numeric]: The mean and median divergence time (MYA) from Homo sapiens obtained from TimeTREE database (http://www.timetree.org/)22) n_occurrences [Numeric; integer]: Number of unique species occurrences in GBIF23) n_geo_occurrences [Numeric; integer]: Number of unique species occurrences with coordinates24) n_sampled_occurrences [Numeric; integer]: Number of sampled occurrence for estimations of range size25) centroid_lat, centroid_long [Numeric; decimal degrees]: Coordinates of the distribution centroid in WGS84 decimal degree 26) range_size [Numeric]: Extent of the range size27) higherGeography ; Verbatim Habitat [Text] Additional info on habitat and distributionextracted automatically form IUCN and GBIF328) biogeography [Text]: species biogeographic region29) total_wiki_pgviews  [Numeric]: Number of wikipedia page views for the species30) wiki_langs  [Numeric]: Number of wikipedia page languages for the species31) wiki_mean_month_pgviews  [Numeric]: Average views of the species’s wikipedia pages monthly32) Total_wos  [Numeric]: Number of papers focusing on the species in the Web of Science33) Assignment [Text]: Author who extracted traits33) Notes [Text]: Any additional information4

Data for "Drivers of species knowledge across the Tree of Life"

https://digital.csic.es/bitstream/10261/344581/3/Read_Me.pdf

Data for "Drivers of species knowledge across the Tree of Life"

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