Computer simulation is an indispensable tool in assisting the design, construction, and operation of accelerators. In particular, computer simulation complements analytical theories and experimental observations in understanding beam dynamics in accelerators. The ultimate function of computer simulation is to study mechanisms that limit the performance of frontier accelerators. There are four goals for the benchmarking of computer simulation codes, namely debugging, validation, comparison and verification: (1) Debugging--codes should calculate what they are supposed to calculate; (2) Validation--results generated by the codes should agree with established analytical results for specific cases; (3) Comparison--results from two sets of codes should agree with each other if the models used are the same; and (4) Verification--results from the codes should agree with experimental measurements. This is the summary of the joint session among working groups A, B, and D of the HI32006 Workshop on computer codes benchmarking