The diagnosis of adenocarcinomas located in the pancreas head, i.e., distal
cholangiocarcinoma (dCCA) and pancreatic ductal adenocarcinoma (PDAC), constitutes a clinical
challenge because they share many symptoms, are not easily distinguishable using imaging techniques
and accurate biomarkers are not available. Searching for biomarkers with potential usefulness in the
differential diagnosis of these tumors, we have determined serum metabolomic profiles in healthy
controls and patients with dCCA, PDAC or benign pancreatic diseases (BPD). Ultra-high-performance
liquid chromatography coupled to mass spectrometry (UHPLC-MS) analysis was performed in serum
samples from dCCA (n = 34), PDAC (n = 38), BPD (n = 42) and control (n = 25) individuals, divided
into discovery and validation cohorts. This approach permitted 484 metabolites to be determined,
mainly lipids and amino acids. The analysis of the results led to the proposal of a logistic regression
model able to discriminate patients with dCCA and PDAC (AUC value of 0.888) based on the
combination of serum levels of nine metabolites (acylcarnitine AC(16:0), ceramide Cer(d18:1/24:0),
phosphatidylcholines PC(20:0/0:0) and PC(O-16:0/20:3), lysophosphatidylcholines PC(20:0/0:0) and
PC(0:0/20:0), lysophosphatidylethanolamine PE(P-18:2/0:0), and sphingomyelins SM(d18:2/22:0) and
SM(d18:2/23:0)) and CA 19-9. In conclusion, we propose a novel specific panel of serum metabolites that can help in the differential diagnosis of dCCA and PDAC. Further validation of their clinical
usefulness in prospective studies is required