Agustinho, Daniel Paiva

Aliyev, Elbay

Avdeyev, Pavel

Barrozo, Enrico R.

Behera, Sairam

Billingsley, Kimberley

Busby, Ben

Chen, Guangyi

Chong, Li Chuin

Choubey, Deepak

Dabbaghie, Fawaz

De Coster, Wouter

Fu, Yilei

Gener, Alejandro R.

Hefferon, Timothy

Henke, David Morgan

Höps, Wolfram

Illarionova, Anastasia

Jochum, Michael D.

Jose, Maria

Kalra, Divya

Kesharwani, Rupesh K.

Khleifat, Ahmad Al

Kolora, Sree Rohit Raj

Kubica, Jedrzej

Lakra, Priya

Lattimer, Damaris

Liew, Chia-Sin

Lo, Bai-Wei

Lo, Chunhsuan

Lowdon, Rebecca

Lötter, Anneri

Mahmoud, Medhat

Majidian, Sina

Mendem, Suresh Kumar

Molik, David

Mondal, Rajarshi

Ohmiya, Hiroko

Parvin, Nasrin

Paulin, Luis F.

Peralta, Carolina

Pfeifer, Susanne P.

Poon, Chi-Lam

Prabhakaran, Ramanandan

Raza, Muhammad Sohail

Saitou, Marie

Sammi, Aditi

Sanio, Philippe

Sapoval, Nicolae

Sedlazeck, Fritz J

Soto, Daniela C.

Syed, Najeeb

Treangen, Todd

Walker, Kimberly

Wang, Gaojianyong

Xu, Tiancheng

Yang, Jianzhi

Zhang, Shangzhe

Zhou, Weiyu

F1000Research

English

PubMed

In October 2021, 59 scientists from 14 countries and 13 U.S. states collaborated virtually in the Third Annual Baylor College of Medicine &amp; DNANexus Structural Variation hackathon. The goal of the hackathon was to advance research on structural variants (SVs) by prototyping and iterating on open-source software. This led to nine hackathon projects focused on diverse genomics research interests, including various SV discovery and genotyping methods, SV sequence reconstruction, and clinically relevant structural variation, including SARS-CoV-2 variants. Repositories for the projects that participated in the hackathon are available at https://github.com/collaborativebioinformatics.</p

Soto, Daniela C

Paulin, Luis F

Pfeifer, Susanne P

Barrozo, Enrico R

Gener, Alejandro R

Jochum, Michael D

Kesharwani, Rupesh K

Kubica, Jędrzej

University of St. Andrews - Pure

The third international hackathon for applying insights into large-scale genomic composition to use cases in a wide range of organisms

In October 2021, 59 scientists from 14 countries and 13 U.S. states collaborated virtually in the Third Annual Baylor College of Medicine & DNANexus Structural Variation hackathon. The goal of the hackathon was to advance research on structural variants (SVs) by prototyping and iterating on open-source software. This led to nine hackathon projects focused on diverse genomics research interests, including various SV discovery and genotyping methods, SV sequence reconstruction, and clinically relevant structural variation, including SARS-CoV-2 variants. Repositories for the projects that participated in the hackathon are available at https://github.com/collaborativebioinformatics

PubMed Central

Brage NMBU

University of St Andrews Research Portal

DATA AVAILABILITY : The data used for these projects were obtained from publicly accessible repositories and are available in Table 1.In October 2021, 59 scientists from 14 countries and 13 U.S. states
collaborated virtually in the Third Annual Baylor College of Medicine &
DNANexus Structural Variation hackathon. The goal of the hackathon
was to advance research on structural variants (SVs) by prototyping
and iterating on open-source software. This led to nine hackathon
projects focused on diverse genomics research interests, including
various SV discovery and genotyping methods, SV sequence
reconstruction, and clinically relevant structural variation, including
SARS-CoV-2 variants. Repositories for the projects that participated in
the hackathon are available at https://github.com/collaborativebioinformatics.The National Library of Medicine,  ALS Association Milton Safenowitz Research Fellowship, The Motor Neurone Disease Association (MNDA) Fellowship, The NIHR Maudsley Biomedical Research Centre, a National Science Foundation CAREER grant, The Research Council of Norway, a postdoctoral fellowship from the FWO, the Swiss National Science Foundation, the USDA Agricultural Research Service HQ Research Associate program in Big Data, China Scholarship Council PhD scholarship, and the Centers for Disease Control and Prevention through the Association of Public Health Laboratories.http://f1000research.comam2023Biochemistr

Al Khleifat, Ahmad

Hops, Wolfram

Poo, Chi-Lam

Sedlazeck, Fritz J.

UPSpace at the University of Pretoria

DigitalCommons@The Texas Medical Center

The Third International Hackathon for Applying Insights Into Large-Scale Genomic Composition To Use Cases in a Wide Range of Organisms

https://digitalcommons.library.tmc.edu/cgi/viewcontent.cgi?article=3647&context=baylor_docs

The third international hackathon for applying insights into large-scale genomic composition to use cases in a wide range of organisms

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University of St. Andrews - Pure

PubMed Central

Brage NMBU

University of St Andrews Research Portal

University of St. Andrews - Pure

UPSpace at the University of Pretoria

DigitalCommons@The Texas Medical Center