Bohr, Henrik

Lindgård, Per-Anker

A homology measure for protein fold classes has been constructed by locally projecting consecutive secondary structures onto a lattice. Taking into account hydrophobic forces we have found a mechanism for formation of domains containing magic numbers of secondary structures and multipla of these domains. We have performed a statistical analysis of available protein structures and found agreement with the predicted preferred abundances. Furthermore, a connection between sequence information and fold classes is established in terms of hinge forces between the structural elements

Online Research Database In Technology

Magic Numbers in Protein Structures

http://orbit.dtu.dk/ws/files/3924020/Bohr.pdf

Magic Numbers in Protein Structures

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Online Research Database In Technology