This paper describes a study undertaken to explain the risk profile differences in the results of PRAs of two similar WER-1000 nuclear power plants. The risk profile differences are particularly significant in the area of small steam/feedwater line breaks, small-small LOCAs, support system initiators and containment bypass initiators. A top level (limited depth) approach was used in which we studied design differences, major assumptions, data differences, and also compared the two PRA analyses on an element-by-element basis in order to discern the major causative factors for the risk profile differences. We conclude that the major risk profile differences are due to differences in assumptions and engineering judgment (possibly combined with some design and data differences) involved in treatment of uncertain physical phenomena (primarily sump plugging in LOCAs and turbine building steaming effects in secondary system breaks). Additional major differences are attributable to support system characteristics