The feature detection rule and its application within the negative selection algorithm

Abstract

The negative selection algorithm developed by Forrest et al. was inspired by the manner in which T-cell lymphocytes mature within the thymus before being released into the blood system. The resultant T-cell lymphocytes, which are then released into the blood, exhibit an interesting characteristic: they are only activated by non-self cells that invade the human body. The work presented in this thesis examines the current body of research on the negative selection theory and introduces a new affinity threshold function, called the feature-detection rule. The feature-detection rule utilises the inter-relationship between both adjacent and non-adjacent features within a particular problem domain to determine if an artificial lymphocyte is activated by a particular antigen. The performance of the feature-detection rule is contrasted with traditional affinity-matching functions currently employed within negative selection theory, most notably the r-chunks rule (which subsumes the r-contiguous bits rule) and the hamming-distance rule. The performance will be characterised by considering the detection rate, false-alarm rate, degree of generalisation and degree of overfitting. The thesis will show that the feature-detection rule is superior to the r-chunks rule and the hamming-distance rule, in that the feature-detection rule requires a much smaller number of detectors to achieve greater detection rates and less false-alarm rates. The thesis additionally refutes that the way in which permutation masks are currently applied within negative selection theory is incorrect and counterproductive, while placing the feature-detection rule within the spectrum of affinity-matching functions currently employed by artificial immune-system (AIS) researchers.Dissertation (MSc)--University of Pretoria, 2009.Computer ScienceUnrestricte