Abstract The Eurasian black vulture (Aegypius monachus) is a globally endangered species, vulnerable in Europe and endangered in Greece. We modelled its nesting preferences in Dadia reserve, northeastern Greece using logistic models at multi-scale level combined by Bayesian statistics. Compared with the random sites, the vultures nested at trees with greater diameter (DBH), lower height, and lower total number of trees around the nest tree, steeper slopes and greater distance from forest roads. Our results indicate that conservation and management guidelines for black vultures must aim: (1) to preserve old, isolated mature trees in the reserve, (2) to maintain the zones of strict protection as vulture sanctuary, including most of the suitable nesting habitat, (3) to protect the apparently suitable but still unused habitat in the rest of the reserve from disturbance and logging, (4) to monitor any changes in habitats and use our models to evaluate and predict their effect on vulture nesting in the reserve