Forest Stand Structure and Primary Production in relation to Ecosystem Development, Disturbance, and Canopy Composition

Temperate forests are complex ecosystems that sequester carbon (C) in biomass. C storage is related to ecosystem-scale forest structure, changing over succession, disturbance, and with community composition. We quantified ecosystem biological and physical structure in two forest chronosequences varying in disturbance intensity, and three late successional functional types to examine how multiple structural expressions relate to ecosystem C cycling. We quantified C cycling as wood net primary production (NPP), ecosystem structure as Simpson’s Index, and physical structure as leaf quantity (LAI) and arrangement (rugosity), examining how wood NPP-structure relates to light distribution and use-efficiency. Relationships between structural attributes of biodiversity, LAI, and rugosity differed. Development of rugosity was conserved regardless of disturbance and composition, suggesting optimization of vegetation arrangement over succession. LAI and rugosity showed significant positive productivity trends over succession, particularly within deciduous broadleaf forests, suggesting these measures of structure contain complementary, not redundant, information related to C cycling

Region-wide temporal and spatial variation in Caribbean reef architecture: is coral cover the whole story?

The architectural complexity of coral reefs is largely generated by reef-building corals, yet the effects of current regional-scale declines in coral cover on reef complexity are poorly understood. In particular, both the extent to which declines in coral cover lead to declines in complexity and the length of time it takes for reefs to collapse following coral mortality are unknown. Here we assess the extent of temporal and spatial covariation between coral cover and reef architectural complexity using a Caribbean-wide dataset of temporally replicated estimates spanning four decades. Both coral cover and architectural complexity have declined rapidly over time, with little evidence of a time-lag. However, annual rates of change in coral cover and complexity do not covary, and levels of complexity vary greatly among reefs with similar coral cover. These findings suggest that the stressors influencing Caribbean reefs are sufficiently severe and widespread to produce similar regional-scale declines in coral cover and reef complexity, even though reef architectural complexity is not a direct function of coral cover at local scales. Given that architectural complexity is not a simple function of coral cover, it is important that conservation monitoring and restoration give due consideration to both architecture and coral cover. This will help ensure that the ecosystem services supported by architectural complexity, such as nutrient recycling, dissipation of wave energy, fish production and diversity, are maintained and enhanced

Ontogenetic shifts in perceptions of safety along structural complexity gradients in a territorial damselfish.

Age and body size can influence predation risk and hence habitat use. Many species undergo ontogenetic shifts in habitat use as individuals grow larger and have different age-specific predation pressures. On coral reefs, a number of fish species are more tolerant of threats in structurally complex habitats that contain more refuges than in less structurally complex habitats. However, we do not know how risk perception varies with age, and whether age interacts with habitat complexity. Adults and juveniles, because of their size, may face different risks in structurally simple versus complex habitats. We used flight initiation distance as a metric to analyze perceptions of risk in a species of damselfish Stegastes nigricans. All else being equal, fish fleeing at greater distances are inferred to perceive higher risk. We targeted juvenile and adult damselfish to assess whether there are ontogenetic shifts in perceptions of safety in relation to structural complexity, inferred based on percent coral cover and rugosity. We found that adult damselfish tolerated closer approach in more complex habitats as measured by percent coral cover, but not rugosity, whereas juvenile fish always allowed closer approach than adult fish regardless of complexity. This ontogenetic shift in habitat use may result from juvenile fish taking bigger risks to maximize growth, whereas older animals, who are closer to their maximum body size, can afford to take fewer risks and protect their assets

Study of passive control study of the cavitation instability on a venturi profile

As a source of vibrations, noise, erosion and structure damages, cavitation is a major handicap for many industrial flows used in different domains from propeller or pump studies, to the analysis of hydrodynamic flows around a profile. This work presents results of the effect of a passive control method, based on surface roughness, on a venturi profile in order to determine how to reduce or even suppress cloud cavitation developed on its suction side. Visualizations and velocity measurements permit to detect the influence of roughness on flow development. So as to have a better understanding of flow dynamics of sheet and cloud cavitation, robust mathematical methods of imaging post-processing have been used like Proper Orthogonal Decomposition

Marine Benthic Habitat Mapping of Muir Inlet, Glacier Bay National Park and Preserve, Alaska With an Evaluation of the Coastal and Marine Ecological Classification Standard III

Seafloor geology and potential benthic habitats were mapped in Muir Inlet, Glacier Bay National Park and Preserve, Alaska, using multibeam sonar, ground-truth information, and geological interpretations. Muir Inlet is a recently deglaciated fjord that is under the influence of glacial and paraglacial marine processes. High glacially derived sediment and meltwater fluxes, slope instabilities, and variable bathymetry result in a highly dynamic estuarine environment and benthic ecosystem. We characterize the fjord seafloor and potential benthic habitats using the Coastal and Marine Ecological Classification Standard (CMECS) recently developed by the National Oceanic and Atmospheric Administration (NOAA) and NatureServe. Substrates within Muir Inlet are dominated by mud, derived from the high glacial debris flux. Water-column characteristics are derived from a combination of conductivity temperature depth (CTD) measurements and circulation-model results. We also present modern glaciomarine sediment accumulation data from quantitative differential bathymetry. These data show Muir Inlet is divided into two contrasting environments: a dynamic upper fjord and a relatively static lower fjord. The accompanying maps represent the first publicly available high-resolution bathymetric surveys of Muir Inlet. The results of these analyses serve as a test of the CMECS and as a baseline for continued mapping and correlations among seafloor substrate, benthic habitats, and glaciomarine processes

Absorption in quantum electrodynamics cavities in terms of a quantum jump operator

We describe the absorption by the walls of a quantum electrodynamics cavity as a process during which the elementary excitations (photons) of an internal mode of the cavity exit by tunneling through the cavity walls. We estimate by classical methods the survival time of a photon inside the cavity and the quality factor of its mirrors

MODERATE SEVERITY DISTURBANCE HAS SIMILAR EFFECTS ON THE PRODUCTION OF THREE FORESTS NESTED WITHIN THE UPPER GREAT LAKES LANDSCAPE

Moderate severity disturbances, which only kill a subset of canopy trees (e.g., via insects, pathogens, and windthrow), are increasingly widespread, and can alter forest structure and production. Whether moderate severity disturbance similarly affects the net primary production (NPP) of different forest stands within inherently heterogeneous landscapes, however, is unknown. We experimentally disturbed three, 2-ha stands varying in forest structure and primary production, reducing stand basal area 38 to 66 % by stem girdling all mature early successional aspen (Populus) and birch (Betula). For nearly a decade, we examined how the forest stands restructured and recovered, and linked post-recovery physical and biological structure with light absorption and wood NPP. Disturbance significantly altered the structure of all stands and prompted a similar decade-long pattern of primary production decline and recovery. All stands exhibited an initial reduction in wood NPP, recovering to, or exceeded pre-disturbance levels within eight years. Following the recovery of wood NPP, more biologically diverse forest canopies with higher leaf area indexes captured more light, and, subsequently, had higher rates of wood NPP. We provide limited support that disturbance may enhance long-term primary production through its effects on canopy structural reorganization. We conclude that, while the forests examined responded similarly to disturbance, improved understanding of different forest ecosystems’ response to disturbance remains critical to informing carbon management decisions across diverse landscape mosaics

Modeling river bed morphology, roughness, and surface sedimentology using high resolution terrestrial laser scanning

Recent advances in technology have revolutionized the acquisition of topographic data, offering new perspectives on the structure and morphology of the Earth's surface. These developments have had a profound impact on the practice of river science, creating a step change in the dimensionality, resolution, and precision of fluvial terrain models. The emergence of “hyperscale” survey methods, including structure from motion photogrammetry and terrestrial laser scanning (TLS), now presents the opportunity to acquire 3‐D point cloud data that capture grain‐scale detail over reach‐scale extents. Translating these data into geomorphologically relevant products is, however, not straightforward. Unlike traditional survey methods, TLS acquires observations rapidly and automatically, but unselectively. This results in considerable “noise” associated with backscatter from vegetation and other artifacts. Moreover, the large data volumes are difficult to visualize; require very high capacity storage; and are not incorporated readily into GIS and simulation models. In this paper we analyze the geomorphological integrity of multiscale terrain models rendered from a TLS survey of the braided River Feshie, Scotland. These raster terrain models are generated using a new, computationally efficient geospatial toolkit: the topographic point cloud analysis toolkit (ToPCAT). This performs an intelligent decimation of point cloud data into a set of 2.5‐D terrain models that retain information on the high‐frequency subgrid topography, as the moments of the locally detrended elevation distribution. The results quantify the degree of terrain generalization inherent in conventional fluvial DEMs and illustrate how subgrid topographic statistics can be used to map the spatial pattern of particle size, grain roughness, and sedimentary facies at the reach scale.Components of this research were supported by the UK Natural Environment Research Council (grant NE/G005427/1) with additional support from the NERC Geophysical Equipment Facility (Loan 892). Damia Vericat is supported by a Ramon y Cajal fellowship (RYC‐2010‐06264) from the Spanish Ministry of Science

Reef fishes of Saba Bank, Netherlands Antilles : Assemblage structure across a gradient of habitat types

Saba Bank is a 2,200 km2 submerged carbonate platform in the northeastern Caribbean Sea off Saba Island, Netherlands Antilles. The presence of reef-like geomorphic features and significant shelf edge coral development on Saba Bank have led to the conclusion that it is an actively growing, though wholly submerged, coral reef atoll. However, little information exists on the composition of benthic communities or associated reef fish assemblages of Saba Bank. We selected a 40 km2 area of the bank for an exploratory study. Habitat and reef fish assemblages were investigated in five shallow-water benthic habitat types that form a gradient from Saba Bank shelf edge to lagoon. Significant coral cover was restricted to fore reef habitat (average cover 11.5%) and outer reef flat habitat (2.4%) and declined to near zero in habitats of the central lagoon zone. Macroalgae dominated benthic cover in all habitats (average cover: 32.5 – 48.1%) but dominant algal genera differed among habitats. A total of 97 fish species were recorded. The composition of Saba Bank fish assemblages differed among habitat types. Highest fish density and diversity occurred in the outer reef flat, fore reef and inner reef flat habitats. Biomass estimates for commercially valued species in the reef zone (fore reef and reef flat habitats) ranged between 52 and 83 g/m2. The composition of Saba Bank fish assemblages reflects the absence of important nursery habitats, as well as the effects of past fishing. The relatively high abundance of large predatory fish (i.e. groupers and sharks), which is generally considered an indicator of good ecosystem health for tropical reef systems, shows that an intact trophic network is still present on Saba Bank