The Draft Genome of the Invasive Walking Stick, Medauroidea extradendata, Reveals Extensive Lineage-Specific Gene Family Expansions of Cell Wall Degrading Enzymes in Phasmatodea.

Plant cell wall components are the most abundant macromolecules on Earth. The study of the breakdown of these molecules is thus a central question in biology. Surprisingly, plant cell wall breakdown by herbivores is relatively poorly understood, as nearly all early work focused on the mechanisms used by symbiotic microbes to breakdown plant cell walls in insects such as termites. Recently, however, it has been shown that many organisms make endogenous cellulases. Insects, and other arthropods, in particular have been shown to express a variety of plant cell wall degrading enzymes in many gene families with the ability to break down all the major components of the plant cell wall. Here we report the genome of a walking stick, Medauroidea extradentata, an obligate herbivore that makes uses of endogenously produced plant cell wall degrading enzymes. We present a draft of the 3.3Gbp genome along with an official gene set that contains a diversity of plant cell wall degrading enzymes. We show that at least one of the major families of plant cell wall degrading enzymes, the pectinases, have undergone a striking lineage-specific gene family expansion in the Phasmatodea. This genome will be a useful resource for comparative evolutionary studies with herbivores in many other clades and will help elucidate the mechanisms by which metazoans breakdown plant cell wall components

Advanced architectural descriptors in foams: novel 3D computational methods

This work presents 3D computational strategies aimed at providing foam de-structuration of the basic components of a cellular material (struts and cell walls) offering the possibility of analysing separately the structural elements that play an important role in the physical properties of thee materials. Two different methodologies have been used depending on the topological similarities existing between the struts and cell walls: 3D erosion-dilation procedure (thick struts) and solid classification algorithm (thin struts). In a second step, analysis of cell walls is performed in order to show the advantages of analysing separately the two foams components. Particularly, cell wall thickness distribution reveals differences that could not be found prior to the de-structuration

Plural output optimetric sample cell and analysis system

An apparatus suitable for receiving a sample for optimetric analysis includes a sample cell comprising an opaque hollow tube. Several apertures are defined in the wall of the tubing and a lens barrel which extends beyond to opposite surfaces of the wall is supported within at least one of the apertures. A housing is provided with one channel for receiving the sample cell and a series of channels extending from the exterior housing to the sample cell apertures. A filter element is housed in each of these latter channels. These channels slidingly receive an excitation light source for a photodetector cell to permit selective focusing. A sample cell containing at least three apertures in the walls can be mounted for rotation relative to a light source or photoconduction means for simultaneous or alternative optimetric determination of the components of a single sample. The sample cell is fabricated by supporting a lens barrel within the aperture. A molten portion of glass is deposited in the lens barrel and cooled while in a horizontal position to form a lens having an acceptable angle

3D Experimental investigation of the hygro-mechanical behaviour of wood at cellular and sub-cellular scale: detection of local deformations

The swelling/shrinkage of spruce wood samples (Picea Abies) is documented with high resolution XRay Tomography and advanced image analysis tools. We report the reversible moisture-induced global and local deformations at the cellular and sub-cellular scales. In particular, we present sophisticated methods for detecting local deformations in the cell wall. Insight is given on the hygromechanical behaviour of wood cell material and on the role of ultra-cellular components in wood, such as bordered pits and rays

Enhanced lipid extraction from unbroken microalgal cells using enzymes

The marine microalga Nannochloropsis sp. was chosen as a model organism to investigate the feasibility of using cell wall-degrading enzymes to enhance the recovery of intracellular lipids. An enzyme cocktail containing galactomannanase, 1,4-β-cellobiosidase and β-glucosidase as main components was prepared from commercial enzyme preparations. The effects of pretreatment time (P), enzyme dosage (D), pH and temperature (T) on the amount of extracted lipids were investigated using response surface methodology. Under the best conditions (P = 90 min, D = 1.3 mg g–1, pH = 5, T = 36°C) over 70% of the lipids present in the microalga were recovered. SEM and TEM characterization of enzyme-treated microalgae showed extensive cell damage with significant disruption of the cell wall and release of algal material. Overall, the results of this study strongly support the use of commercial enzyme preparations to improve lipid recovery from microalgae and provide useful information on the influence of process conditions on the treatment efficiency

The Induction of Meningeal Inflammation by Components of the Pneumococcal Cell Wall

Pneumococcal cell wall induces meningeal inflammation in rabbits injected intracisternally with >105 cell equivalents. Both of the major cell wall components, teichoic acid and peptidoglycan, contribute to this inflammatory activity although responses differ depending on the chemical nature, size, and complexity of these fractions. Challenge with teichoic acid (membrane or wall associated) results in greater inflammation at 5 hr than at 24 hr. Degraded teichoic acid is inactive. In contrast, the inflammation caused by whole cell wall or high-molecular-weight peptidoglycan-containing fractions increases in intensity from 5 to 24 hr. Peptidoglycan fractions lose activity at 24 hr when hydrolyzed to disaccharide-stem peptide moieties. Generation of free cell wall components in cerebrospinal fluid as, for example, during treatment with antibiotics that are bacteriolytic as well as bactericidal, could contribute to increased inflammation in the subarachnoid spac

Quantitative Analysis of Candida Cell Wall Components by Flow Cytometrywith Triple-Fluorescence Staining

This work was supported by the European Commission within the FP7 Framework Programme [Fungitect-Grant No 602125]. We also thank Thomas Sauer, Vienna Biocenter Campus (VBC), Austria, for technical support at the FACS facility of the MFPL, Karl Kuchler, MFPL-Department of Medical Biochemistry, Medical University of Vienna, Max F. Perutz Laboratories, Campus Vienna Biocenter, Vienna, Austria and Ernst Thuer, Centre for Genomic Regulation, Barcelona, Spain, for advice on statistical approaches. Neil Gow acknowledges the support of the Wellcome Trust and the MRC Centre for Medical MycologyPeer reviewedPublisher PD

Expression of genes involved in cell wall structural components in different genotypes of Theobroma cacao

Resistant in this main way to control witches´ broom resistance, therefore the understanding of pathogen infection and its disease resistance mechanism is very important in order to obtain durable resistance. Through the technique of in situ hybridization, the current study aimed to determine the expression of genes involved in possible mechanisms of resistance of cacao and in which stages of the infection they are acting. Apical meristems of susceptible and resistant genotypes of Theobroma cacao to witches' broom disease were artificially inoculated by placing a drop with a 5x105 basidiospore/mL. Meristems were collected at intervals of 3, 6, 12, 24, 48 and 72 hours, 5 and 15 days after the inoculation day, under free RNAse. The samples were fixed and sent for analysis of gene expression by in Situ Hybridization. HRGP genes (Hidroxyproline-rich glycoprotein) and RGC2 related to cell wall metabolism or plant defense mechanism, were chosen from cDNA libraries available at UESC/ CEPLAC/CEPEC. The analysis showed the localization in the in cells of the vascular system and in parenchymatous cells of the apical meristem in both resistant as well as susceptible genotype. However, no significant variation in the accumulation of HRGP and RGC2 genes were observed between genotypes. Thus, we suggest further investigation with earlier timein order to ascertain whether there is variation in the accumulation of such genes between the genotypes under study. (Texte intégral