98 research outputs found
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Rapid diffusion method for physicochemical characterization of metal ligands in soils and sediments
A diffusion method is described that allows preliminary characterization of metals in soils and sediments while minimizing the potential for alteration of metal form. In addition, examples of the application of the method to model compounds of Pu in the soil are given. (ERB
LOSS-OF-COOLANT ACIDENT SIMULATIONS IN THE NATIONAL RESEARCH UNIVERSAL REACTOR
Pressurized water reactor loss-of-coolant accident (LOCA) phenomena are being simulated with a series of experiments in the U-2 loop of the National Research Universal Reactor at Chalk River, Ontario, Canada. The first of these experiments includes up to 45 parametric thermal-hydraulic tests to establish the relationship among the reflood delay time of emergency coolant, the reflooding rate, and the resultant fuel rod cladding peak temperature. Subsequent experiments establish the fuel rod failure characteristics at selected peak cladding temperatures. Fuel rod cladding pressurization simulates high burnup fission gas pressure levels of modern PWRs. This document contains both an experiment overview of the LOCA simulation program and a review of the safety analyses performed by Pacific Northwest Laboratory (PNL) to define the expected operating conditions as well as to evaluate the worst case operating conditions. The primary intent of this document is to supply safety information required by the Chalk River Nuclear Laboratories (CRNL), to establish readiness to proceed from one test phase to the next and to establish the overall safety of the experiment. A hazards review summarizes safety issues, normal operation and three worst case accidents that have been addressed during the development of the experiment plan
De novo assembly of Euphorbia fischeriana root transcriptome identifies prostratin pathway related genes
Background
Euphorbia fischeriana is an important medicinal plant found in Northeast China. The plant roots contain many medicinal compounds including 12-deoxyphorbol-13-acetate, commonly known as prostratin that is a phorbol ester from the tigliane diterpene series. Prostratin is a protein kinase C activator and is effective in the treatment of Human Immunodeficiency Virus (HIV) by acting as a latent HIV activator. Latent HIV is currently the biggest limitation for viral eradication. The aim of this study was to sequence, assemble and annotate the E. fischeriana transcriptome to better understand the potential biochemical pathways leading to the synthesis of prostratin and other related diterpene compounds.
Results
In this study we conducted a high throughput RNA-seq approach to sequence the root transcriptome of E. fischeriana. We assembled 18,180 transcripts, of these the majority encoded protein-coding genes and only 17 transcripts corresponded to known RNA genes. Interestingly, we identified 5,956 protein-coding transcripts with high similarity (>=75%) to Ricinus communis, a close relative to E. fischeriana. We also evaluated the conservation of E. fischeriana genes against EST datasets from the Euphorbeacea family, which included R. communis, Hevea brasiliensis and Euphorbia esula. We identified a core set of 1,145 gene clusters conserved in all four species and 1,487 E. fischeriana paralogous genes. Furthermore, we screened E. fischeriana transcripts against an in-house reference database for genes implicated in the biosynthesis of upstream precursors to prostratin. This identified 24 and 9 candidate transcripts involved in the terpenoid and diterpenoid biosyntehsis pathways, respectively. The majority of the candidate genes in these pathways presented relatively low expression levels except for 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (HDS) and isopentenyl diphosphate/dimethylallyl diphosphate synthase (IDS), which are required for multiple downstream pathways including synthesis of casbene, a proposed precursor to prostratin.
Conclusion
The resources generated in this study provide new insights into the upstream pathways to the synthesis of prostratin and will likely facilitate functional studies aiming to produce larger quantities of this compound for HIV research and/or treatment of patients
Materials Test-2 LOCA Simulation in the NRU Reactor
A simulated loss-of-coolant accident was performed with a full-length test bundle of pressurized water reactor fuel rods. This third experiment of the program produced fuel cladding temperatures exceeding 1033 K (1400°F) for 155 s and resulted in eight ruptured fuel rods. Experiment data and initial results are presented in the form of photographs and graphical summaries
Subsurface interactions of actinide species and microorganisms: Implications for the bioremediation of actinide-organic mixtures
Potential mechanisms of attenuation for rifampicin-passaged strains of Flavobacterium psychrophilum
Grand Challenges for Biological and Environmental Research: A Long-Term Vision
The interactions and feedbacks among plants, animals, microbes, humans, and the environment ultimately form the world in which we live. This world is now facing challenges from a growing and increasingly affluent human population whose numbers and lifestyles are driving ever greater energy demand and impacting climate. These and other contributing factors will make energy and climate sustainability extremely difficult to achieve over the 20-year time horizon that is the focus of this report. Despite these severe challenges, there is optimism that deeper understanding of our environment will enable us to mitigate detrimental effects, while also harnessing biological and climate systems to ensure a sustainable energy future. This effort is advanced by scientific inquiries in the fields of atmospheric chemistry and physics, biology, ecology, and subsurface science - all made possible by computing. The Office of Biological and Environmental Research (BER) within the Department of Energy's (DOE) Office of Science has a long history of bringing together researchers from different disciplines to address critical national needs in determining the biological and environmental impacts of energy production and use, characterizing the interplay of climate and energy, and collaborating with other agencies and DOE programs to improve the world's most powerful climate models. BER science focuses on three distinct areas: (1) What are the roles of Earth system components (atmosphere, land, oceans, sea ice, and the biosphere) in determining climate? (2) How is the information stored in a genome translated into microbial, plant, and ecosystem processes that influence biofuel production, climate feedbacks, and the natural cycling of carbon? (3) What are the biological, geochemical, and physical forces that govern the behavior of Earth's subsurface environment? Ultimately, the goal of BER science is to support experimentation and modeling that can reliably predict the outcomes and behaviors of complex biological and environmental systems, leading to robust solutions for DOE missions and strategic goals. In March 2010, the Biological and Environmental Research Advisory Committee held the Grand Challenges for Biological and Environmental Research: A Long-Term Vision workshop to identify scientific opportunities and grand challenges for BER science in the coming decades and to develop an overall strategy for drafting a long-term vision for BER. Key workshop goals included: (1) Identifying the greatest scientific challenges in biology, climate, and the environment that DOE will face over a 20-year time horizon. (2) Describing how BER should be positioned to address those challenges. (3) Determining the new and innovative tools needed to advance BER science. (4) Suggesting how the workforce of the future should be trained in integrative system science. This report lays out grand research challenges for BER - in biological systems, climate, energy sustainability, computing, and education and workforce training - that can put society on a path to achieve the scientific evidence and predictive understanding needed to inform decision making and planning to address future energy needs, climate change, water availability, and land use
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