Passive sampling: partition coefficients for a silicone rubber reference phase.

Silicone rubber sheeting can be used as a passive sampling device for hydrophobic organic contaminants in the environment to determine the available concentrations in water and sediments. Reliable sampler-water partition coefficients are required to determine the sampling rates and the dissolved contaminant concentrations in water and in sediment pore water. Log partition coefficients (logKsr,w) for silicone rubber-water have been estimated for 32 polycyclic aromatic hydrocarbons (PAHs), 2 deuterated PAH analogues and 32 chlorobiphenyls (CBs) using the cosolvent method, with methanol as cosolvent. Strong linear relationships were found with literature values for the corresponding log octanol-water partition coefficients (logKow) for both CBs and PAHs, confirming that partitioning into the silicone rubber is strongly determined by the hydrophobicity of the compounds, which suggests logKow is a good predictor of logKsr,w and that absorption is the main mechanism for accumulation of analytes into the silicone rubber polymer

Understanding marine food web dynamics using fatty acid signatures and stable isotope ratios:Improving contaminant impacts assessments across trophic levels

Scotland's marine food webs support a diversity of species and habitats. They contribute to maintaining the balance of the natural environment. Previous studies show that these ecosystems are contaminated by persistent organic pollutants and trace metals; with animals in higher trophic levels (e.g. cetaceans and pinnipeds) containing concentrations that are among the highest found in the ocean. Contaminants represent one of many pressures to which species and habitats are exposed. In assessing the contribution of contaminants to the overall pressure, measuring contaminants at a specific trophic level and then using trophic magnification factors (TMFs) to estimate concentrations at other trophic levels permits assessments across the food web, as well as allowing the adjustment of contaminant concentrations to a particular trophic level for comparison to assessment criteria. Fatty acid (FA) signatures and stable isotope (SI) ratios were used to develop a picture of Scottish marine food web ecology and reliably ascribe trophic levels to a wide range of species. Fatty acid trophic markers (FATMs) were used as trophic level indicators and with SI analysis, permitted identification of the mean trophic level of each species and determination of the feeding patterns and predator-prey relationships existing in the Scottish marine food web. Two hundred and eleven (211) samples comprising of seven fish species, one shark species, fourteen marine invertebrate species, three marine mammal species and two zooplankton species from different locations around Scotland were found to have mean trophic levels ranging from 1.47 ± 0.11 in zooplankton to 5.02 ± 0.35 in harbour seal. Fatty acid profile showed specific dietary information which differed between the eleven taxonomic classes and twenty-seven species. The organic and inorganic contaminant concentrations of the species for which trophic level has been determined, together with TMFs, will be reported in future papers

The concentration and biomagnification of trace metals and metalloids across four trophic levels in a marine food web

To be able to assess progress towards “Good Environmental Status” adopted across European Member States, and by the United Kingdom through its 3-stage Marine Strategy, contaminant concentrations and their biological effects need to be assessed in environmental samples by comparison to assessment criteria. This study examines the variability of concentrations (inter- and intra- species variation) of three priority heavy metals (Hg, Cd and Pb) and six additional trace metals and metalloids (As, Ni, Se, Zn, Cu and Cr) in twenty-three species across four trophic levels from different locations around Scotland. Trophic magnification factors (TMFs) were calculated using two methods for metals/metalloids possessing a significant trophic relationship (Hg, Cd, Cu, Ni and Zn) to refine and improve the application of TMFs to assess and predict biomagnification risk of metals/metalloids to biota in the environment. It was concluded that a reasonable balance in sample numbers of lower- versus higher-trophic level organisms is highly recommended when calculating TMFs and appropriate species selection is vital to ensure TMFs accurately represent the selected ecosystem

Seasonal variability of the carbonate system and coccolithophore Emiliania huxleyi at a Scottish Coastal Observatory monitoring site

Lack of information about carbonate chemistry in inshore waters is a ‘knowledge gap’ in assessing the impacts of changing carbonate chemistry on the marine environment. Assessing the response of calcifying phytoplankton to this changing carbonate chemistry requires a greater understanding of temporal variation. This study provides a description of the variability of carbonate parameters at a monitoring site in the eastern coast of Scotland. Four-years of monthly data were analysed to assess the diversity, abundance and morphometrics of coccolithophores in relation to carbonate chemistry and environmental variables. The seasonality in carbonate parameters reflected the seasonal cycle in phytoplankton activity, with higher total alkalinity concentrations and pH and lower dissolved inorganic carbon concentrations during the growing season. The dominant coccolithophore at the site was Emiliania huxleyi which showed a clear seasonal pattern, being more abundant in mid-summer when warmer and nutrient-depleted conditions restricted the annual diatom bloom. This study revealed the presence of three morphotypes of E. huxleyi, type A, type A overcalcified (type AO) and type B, which were seasonally distributed throughout the year. The less calcified form was mainly observed in spring while heavily calcified morphotypes overlapped during summer. Autumn and winter months were dominated by the most calcified form (type AO). These results indicate that the seasonal pattern of E. huxleyi morphotypes was not related to the carbonate concentration at the site. This study reflects the strong interannual variability in carbonate chemistry and the complexity associated with coccolithophore calcification, and highlights the need of long-term data to understand the potential impact of ocean acidification on calcifying phytoplankton

The concentration and biomagnification of PCBs and PBDEs across four trophic levels in a marine food web.

Contracting Parties to the OSPAR Convention for the Protection of the Maine Environment of the North-East Atlantic are required to undertake monitoring and assessment of both inorganic and organic contaminants. There is a requirement to assess contaminants across different trophic levels on an ecosystem-specific basis. However, this is currently constrained by the availability of relevant samples to cover the full range of trophic levels. This study investigates the variability (inter- and intra-species variation) of the concentrations and distributions of thirty-two polychlorinated biphenyl (PCB) congeners and nine polybrominated diphenyl ether (PBDE) congeners in twenty-six species covering four trophic levels from different geographic locations around Scotland. Trophic magnification factors (TMFs) were calculated using a traditional method and a balanced method for both the ICES-7 PCBs and BDE47, to refine and improve the application of TMFs to assess and predict biomagnification risk to biota in the marine environment. There were clear differences in congener percentage distribution between sample categories and species, with differences influenced by physiological processes and eco-biological parameters. Trophic magnification was found to occur for the ICES-7 PCBs and BDE47 using the traditional method, with the highest degree of trophic magnification reported for CB52. An unbalanced dataset was found to influence the calculated TMF and in some cases, the overall conclusion of the trophic transfer of PCB and PBDE congeners. The balanced method is highly recommended for calculating TMFs to ensure that the TMF is a true indication of the biomagnification potential, particularly when conducting regional comparisons for which sampling requirements are difficult to achieve

Inter-species differences in polychlorinated biphenyls patterns from five sympatric species of odontocetes : Can PCBs be used as tracers of feeding ecology?

The authors gratefully acknowledge the assistance of volunteers from the Galician (CEMMA) and Portuguese (SPVS) stranding networks. The authors would like to thank R. Gallois and C. Trichet for their participation on total lipid content analysis. P. Méndez-Fernandez was supported during the research period through a PhD grant from the Fundação do Ministério de Ciência e Tecnologia de Portugal and ANIMATE project (SFRH/BD/36766/2007) and through a Science Without Borders (CSF) young talent postdoctoral grant of the Brazilian government. G. J. Pierce acknowledges support from the EU ANIMATE project (MEXC-CT-2006-042337), University of Aveiro and Caixa Geral de Depósitos (Portugal).Peer reviewedPostprin

Immunopotentiation of Trivalent Influenza Vaccine When Given with VAX102, a Recombinant Influenza M2e Vaccine Fused to the TLR5 Ligand Flagellin

BACKGROUND: Currently controversy exists about the immunogenicity of seasonal trivalent influenza vaccine in certain populations, especially the elderly. STF2.4×M2e (VAX102) is a recombinant fusion protein that links four copies of the ectodomain of influenza virus matrix protein 2 (M2e) antigen to Salmonella typhimurium flagellin, a TLR5 ligand. The objectives of this study were to assess the feasibility of giving VAX102 and TIV in combination in an effort to achieve greater immunogenicity and to provide cross-protection. METHODOLOGY/PRINCIPAL FINDINGS: Eighty healthy subjects, 18-49 years old, were enrolled in May and June 2009 in a double-blind, randomized, controlled trial at two clinical sites. Subjects were randomized to receive either TIV + VAX102 or TIV + placebo. Both arms tolerated the vaccines. Pain at the injection site was more severe with TIV + VAX102. Two weeks after immunization the HAI responses to the H1 and H3 antigens of TIV were higher in those that received TIV + VAX102 than in TIV + placebo (309 vs 200 and 269 vs 185, respectively), although statistically non-significant. There was no difference in the HAI of the B antigen. In the TIV + VAX102 arm, the geometric mean M2e antibody concentration was 0.5 µg/ml and 73% seroconverted. CONCLUSIONS/SIGNIFICANCE: The combination of TIV + VAX102 has the potential to increase the immune response to the influenza A components of TIV and to provide M2e immunity which may protect against influenza A strains not contained in seasonal TIV. TRIAL REGISTRATION: ClinicalTrials.gov NCT00921973

Molecular responses of European flounder (Platichthys flesus) chronically exposed to contaminated estuarine sediments

Molecular responses to acute toxicant exposure can be effective biomarkers, however responses to chronic exposure are less well characterised. The aim of this study was to determine chronic molecular responses to environmental mixtures in a controlled laboratory setting, free from the additional variability encountered with environmental sampling of wild organisms. Flounder fish were exposed in mesocosms for seven months to a contaminated estuarine sediment made by mixing material from the Forth (high organics) and Tyne (high metals and tributyltin) estuaries (FT) or a reference sediment from the Ythan estuary (Y). Chemical analyses demonstrated that FT sediment contained significantly higher concentrations of key environmental pollutants (including polycyclic aromatic hydrocarbons (PAHs), chlorinated biphenyls and heavy metals) than Y sediment, but that chronically exposed flounder showed a lack of differential accumulation of contaminants, including heavy metals. Biliary 1-hydroxypyrene concentration and erythrocyte DNA damage increased in FT-exposed fish. Transcriptomic and 1H NMR metabolomic analyses of liver tissues detected small but statistically significant alterations between fish exposed to different sediments. These highlighted perturbance of immune response and apoptotic pathways, but there was a lack of response from traditional biomarker genes. Gene-chemical association annotation enrichment analyses suggested that polycyclic aromatic hydrocarbons were a major class of toxicants affecting the molecular responses of the exposed fish. This demonstrated that molecular responses of sentinel organisms can be detected after chronic mixed toxicant exposure and that these can be informative of key components of the mixture

Assessment of the toxicological status of small cetacean species from the North West Iberian Peninsula

27th Conference of the European Cetacean Society, Interdisciplinary Approaches in the Study of Marine Mammals, 8th-10th April 2013, Setúbal, PortugalIn order to determine the contamination status and vulnerability of five of the most frequent small cetaceans from the NW Iberian Peninsula (NWIP) (common dolphin Delphinus delphis, harbour porpoise Phocoena phocoena, bottlenose dolphin Tursiops truncatus, striped dolphin Stenella coeruleoalba and long-finned pilot whale Globicephala melas), 32 congeners of polychlorinated biphenyls (PCBs) were analysed in their blubber and 14 trace elements (Ag, As, Cd, Co, Cu, Cr, Fe, Hg, Mn, Ni, Pb, Se, V, Zn) in liver and kidneyN

Parent-of-origin-specific allelic associations among 106 genomic loci for age at menarche.

Age at menarche is a marker of timing of puberty in females. It varies widely between individuals, is a heritable trait and is associated with risks for obesity, type 2 diabetes, cardiovascular disease, breast cancer and all-cause mortality. Studies of rare human disorders of puberty and animal models point to a complex hypothalamic-pituitary-hormonal regulation, but the mechanisms that determine pubertal timing and underlie its links to disease risk remain unclear. Here, using genome-wide and custom-genotyping arrays in up to 182,416 women of European descent from 57 studies, we found robust evidence (P < 5 × 10(-8)) for 123 signals at 106 genomic loci associated with age at menarche. Many loci were associated with other pubertal traits in both sexes, and there was substantial overlap with genes implicated in body mass index and various diseases, including rare disorders of puberty. Menarche signals were enriched in imprinted regions, with three loci (DLK1-WDR25, MKRN3-MAGEL2 and KCNK9) demonstrating parent-of-origin-specific associations concordant with known parental expression patterns. Pathway analyses implicated nuclear hormone receptors, particularly retinoic acid and γ-aminobutyric acid-B2 receptor signalling, among novel mechanisms that regulate pubertal timing in humans. Our findings suggest a genetic architecture involving at least hundreds of common variants in the coordinated timing of the pubertal transition