9 research outputs found

    ntary Movie S2 from Characterization of C-ring component assembly in flagellar motors from amino acid coevolution

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    Prediction of FliN<sub>C</sub>-FliM<sub>C</sub> heterodimerization using coevolutionary signals. This predicted complex is in agreement with reported cross-linking experiments

    Supplementary Figure S7 from Characterization of C-ring component assembly in flagellar motors from amino acid coevolution

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    (A) Predicted parallel conformation of FliM<sub>M</sub> homodimerization in a side-to-side orientation (model I). (B) Predicted twisted conformation of FliM<sub>M</sub> homodimerization in a perpendicular orientation (model II). Representative DCA contacts used to drive FliM<sub>M</sub> association are represented in red

    Supplementary Figure S5 from Characterization of C-ring component assembly in flagellar motors from amino acid coevolution

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    Depiction of representative DCA contacts (in green) as Gaussian interaction potentials driving the association of FliN<sub>C</sub> and FliM<sub>C</sub> (depicted in red and blue, respectively) in MD simulation. These predicted physical interactions are fulfilled in final model

    Supplementary Movie S3 from Characterization of C-ring component assembly in flagellar motors from amino acid coevolution

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    Last step of MD simulation for the prediction of FliM<sub>M</sub> homodimerization using coevolutionary signals. At this final stage, an oscillation between a parallel (mode I) and a twisted configuration (model II)

    Supplementary Figure S2 from Characterization of C-ring component assembly in flagellar motors from amino acid coevolution

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    Prediction of FliN<sub>C</sub> homodimerization using random distributed interaction pairs in an equivalent number to DCA driven simulations. Simulation performed as a negative control for complex formation using DCA as interaction pairs

    Supplementary Figure S3 from Characterization of C-ring component assembly in flagellar motors from amino acid coevolution

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    DCA contacts obtained for FliN<sub>C</sub> considering the non-filtered FliMN_C Pfam domain (PF01052). DCA couplings related to FliN folding are highlighted with blue circles

    Supplementary Movie S1 from Characterization of C-ring component assembly in flagellar motors from amino acid coevolution

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    Prediction of FliN<sub>C</sub> homodimerization using coevolutionary signals. MD simulation was able to recover the X-ray complex model reported (PDB ID: 1O6A) with a lowest RMSD of 0.81 Ã…
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