State-Space Modeling Indicates Rapid Invasion of an Alien Shrub in Coastal Dunes

Invasion by alien plants has negative effects on coastal dunes. Monitoring local spread of invasive species depends on long-term data with sufficient spatial resolution. Bayesian state-space models are a new method for monitoring invasive plants based on unbalanced permanent-plot data. The method allows separation of process and sampling variance, thus enabling ecological predictions with a known degree of uncertainty. The method is applied for the invasive shrub Rosa rugosa (Japanese rose) in Danish fixed dunes. The probability of observing R. rugosa increased significantly from 0.18 to 0.28 during the period 2004-2007. The species was found in all Danish coastal regions, albeit slightly less common in northern Denmark. We discuss the advantages and limitations of using Bayesian state-space models for monitoring and predicting plant invasions using presence-absence data

High herbivore density associated with vegetation diversity in interglacial ecosystems

The impact of large herbivores on ecosystems before modern human activities is an open question in ecology and conservation. For Europe, the controversial wood-pasture hypothesis posits that grazing by wild large herbivores supported a dynamic mosaic of vegetation structures at the landscape scale under temperate conditions before agriculture. The contrasting position suggests that European temperate vegetation was primarily closed forest with relatively small open areas, at most impacted locally by large herbivores. Given the role of modern humans in the world-wide decimations of megafauna during the late Quaternary, to resolve this debate it is necessary to understand herbivore-vegetation interactions before these losses. Here, a synthetic analysis of beetle fossils from Great Britain shows that beetles associated with herbivore dung were better represented during the Last Interglacial (132,000-110,000 y B.P., before modern human arrival) than in the early Holocene (10,000-5,000 y B.P.). Furthermore, beetle assemblages indicate closed and partially closed forest in the early Holocene but a greater mixture of semiopen vegetation and forest in the Last Interglacial. Hence, abundant and diverse large herbivores appear to have been associated with high structural diversity of vegetation before the megafauna extinctions at the end of the Pleistocene. After these losses and in the presence of modern humans, large herbivores generally were less abundant, and closed woodland was more prevalent in the early Holocene. Our findings point to the importance of the formerly rich fauna of large herbivores in sustaining structurally diverse vegetation in the temperate forest biome and provide support for recent moves toward rewildingbased conservation management

Timing of extreme drought modifies reproductive output in semi-natural grassland

Questions Do extreme dry spells in late summer or in spring affect abundance and species composition of the reproductive shoots and the seed rain in the next annual crop? Are drought effects on reproductive shoots related to the rooting depths of species? Location Species-rich semi-natural grassland at Negrentino, Switzerland. Methods In plots under automated rain-out shelters, rainwater was added to simulate normal conditions and compare them with two experimentally effected long dry spells, in late summer (2004) and in the following spring (2005). For 28 plots, numbers of reproductive shoots per species were counted in 1-m2 areas and seed rain was estimated using nine sticky traps of 102 cm2 after dry spells. Results The two extreme dry spells in late summer and spring were similar in length and their probability of recurrence. They independently reduced the subsequent reproductive output of the community, while their seasonal timing modified its species composition. Compared to drought in spring, drought in late summer reduced soil moisture more and reduced the number of reproductive shoots of more species. The negative effects of summer drought decreased with species’ rooting depth. The shallow-rooted graminoids showed a consistent susceptibility to summer drought, while legumes and other forbs showed more varied responses to both droughts. Spring drought strongly reduced density (–53%) and species richness (–43%) of the community seed rain, while summer drought had only a marginally significant impact on seed density of graminoids (–44%). Reductions in seed number per shoot vs reproductive shoot density distinguished the impacts of drought with respect to its seasonal timing. Conclusion The essentially negative impact of drought in different seasons on reproductive output suggests that more frequent dry spells could contribute to local plant diversity loss by aggravating seed deficiency in species-rich grassland

Detecting flying insects using car nets and DNA metabarcoding

Monitoring insects across space and time is challenging, due to their vast taxonomic and functional diversity. This study demonstrates how nets mounted on rooftops of cars (car nets) and DNA metabarcoding can be applied to sample flying insect richness and diversity across large spatial scales within a limited time period. During June 2018, 365 car net samples were collected by 151 volunteers during two daily time intervals on 218 routes in Denmark. Insect bulk samples were processed with a DNA metabarcoding protocol to estimate taxonomic composition, and the results were compared to known flying insect richness and occurrence data. Insect and hoverfly richness and diversity were assessed across biogeographic regions and dominant land cover types. We detected 15 out of 19 flying insect orders present in Denmark, with high proportions of especially Diptera compared to Danish estimates, and lower insect richness and diversity in urbanised areas. We found 319 species not known for Denmark and 174 species assessed in the Danish Red List. Our results indicate that the methodology can assess the flying insect fauna at large spatial scales to a wide extent, but may be, like other methods, biased towards certain insect orders.Statistical analyses were carried out in RStudio on the original samples (size sorted samples were merged prior to analysis). Scripts can be found here: https://github.com/CecSve/InsectMobile_CarNet. The data in this Dryad repository are the data used in script 02. Funding provided by: Aage V. Jensens FondeCrossref Funder Registry ID: http://dx.doi.org/10.13039/501100002721Award Number:Flying insects were collected with car nets during June 2018 in Denmark. Citizen scientists drove back and forth on 5 km routes and the insects were shipped to the Natural History Museum of Denmark in 96% EtOH. The insects were size sorted in two size fractions prior to DNA extraction with a non-destructive DNA lysis buffer and further processing with a DNA metabarcoding protocol. The full laboratory protocol for the research project 'InsectMobile' can be accessed here: https://dx.doi.org/10.17504/protocols.io.bmunk6ve. Only the output of fwh primer pair is used in this study

Putting plant resistance traits on the map: A test of the idea that plants are better defended at lower latitudes

It has long been believed that plant species from the tropics have higher levels of traits associated with resistance to herbivores than do species from higher latitudes. A meta-analysis recently showed that the published literature does not support thi