894 research outputs found
Beware Of Popular Kids Bearing Gifts:A Framed Field Experiment
ArticleThe literature on pro-social behavior shows that older children are more generous than
younger children; however, the level of individual generosity is heterogeneous even
between children of the same age. This paper investigates whether a child’s popularity
affects his/her generosity. Our participants – 231 children, six to twelve years old – decide
how many of their four colored wristbands they want to share with another anonymous
child. We manipulate the visibility of this decision: in treatment Public, the decisions are
revealed to the entire class at the end of the game, whereas in treatment Private children’s
decisions remain secret. In addition, we elicited each child’s network of friends using an
innovative “seating map” mechanism. Our results reveal that more popular children are
more generous in Public than Private decision environments, while less popular children
behave similarly in both cases. Moreover, older children in Public display greater
generosity than (i) older children in Private and (ii) younger children in either Public or
Private. Finally, in Public, older and more popular children share more than less popular
older children, and more than younger children regardless of popularity; whereas, in
Private there is no effect of popularity on children of any age. Our findings point to another
reason to adopt transparent decision making in teams and organizations: it may promote
the generosity of some (perhaps especially popular leaders) without detrimentally
impacting the pro-sociality of others
The repetitive structure of DNA clamps: An overlooked protein tandem repeat
Structured tandem repeats proteins (STRPs) are a specific kind of tandem repeat proteins characterized by a modular and repetitive three-dimensional structure arrangement. The majority of STRPs adopt solenoid structures, but with the increasing availability of experimental structures and high-quality predicted structural models, more STRP folds can be characterized. Here, we describe “Box repeats”, an overlooked STRP fold present in the DNA sliding clamp processivity factors, which has eluded classification although structural data has been available since the late 1990s. Each Box repeat is a β⍺βββ module of about 60 residues, which forms a class V “beads-on-a-string” type STRP. The number of repeats present in processivity factors is organism dependent. Monomers of PCNA proteins in both Archaea and Eukarya have 4 repeats, while the monomers of bacterial beta-sliding clamps have 6 repeats. This new repeat fold has been added to the RepeatsDB database, which now provides structural annotation for 66 Box repeat proteins belonging to different organisms, including viruses
Análise do acúmulo de transcritos de ?-3-dessaturases em genótipos de soja contrastantes para o teor de ácido linolênico.
Os ácidos graxos poliinsaturados, como linoléico e linolênico, são os principais responsáveis pela alta instabilidade oxidativa a altas temperaturas do óleo destinado a frituras e à fabricação de biodiesel. A biossíntese de ácidos graxos poliinsaturados é catalisada pelas dessaturases. A -6-dessaturase converte ácido oléico (18:19) a linoléico (18:29,12) e a -3-dessaturase produz ácido linolênico (18:39,12,15) a partir de 18:29,12. Três genes principais (GmFAD3A, GmFAD3B e GmFAD3C) foram caracterizados como responsáveis pela produção de -3-dessaturase em soja. Os mecanismos precisos de regulação da produção de ácido linolênico ainda não são muito claros, o que dificulta o processo de obtenção de genótipos com baixo conteúdo desse ácido graxo. A análise molecular de mutantes de soja com baixo conteúdo de ácido linolênico poderá ajudar a elucidar tais mecanismos. Os objetivos principais deste trabalho foram determinar os níveis de mRNAs das principais -3-dessaturases, correlacionando-os com as concentrações relativas de ácidos linolênico durante a ontogenia da semente de soja em genótipos normais e mutantes. Para isso, foram utilizados três genótipos contrastantes para essa característica: A29, (~1% 18:315,12,9); N85-2176 (~3% 18:315,12,9) e Tucunaré (Variedade comercial, ~8% 18:315,12,9). As plantas foram cultivadas em casa de vegetação e suas sementes foram coletadas separadamente em 5 estádios de desenvolvimento de acordo com o peso úmido da semente: 1º estádio: 0 a 125 mg; 2º estádio: 126 a 250 mg; 3º estádio: 251 a 375 mg; 4º estádio: superior a 376 mg; 5 º estádio: semente madura. Os teores de ácidos graxos na fração óleo das sementes nos cinco estádios de desenvolvimento foram determinados por cromatografia gasosa e a expressão gênica, por PCR quantitativo, utilizando como o controle endógeno o gene da GAPDH (gliceraldeído-3-fosfato desidrogenase). De modo geral, o conteúdo de 18:39,12,15 decresceu drasticamente nos estádios iniciais em todos os genótipos. No entanto, não foi observada expressão diferencial entre os genes GmFAD3A, GmFAD3B e GmFAD3C, que pudessem explicar tais alterações. O genótipo A29, seguido de N85-2176, apresentou a menor concentração de 18:39,12,15 durante todo o desenvolvimento da semente. Estes genótipos apresentaram expressão praticamente nula do gene GmFAD3A. Além disso, A29 apresentou expressão reduzida do gene GmFAD3B. Assim, pelo menos em parte, os níveis de transcritos dos genes GmFAD3A e GmFAD3B explicam as diferenças na concentração de ácidos graxos da fração óleo em A29 e N85-2176. Apoio financeiro: CNPq e CAPES
Retardamento de colheita como método de diferenciação de genótipos de soja para qualidade de sementes.
O retardamento de colheita após o estádio R8 de maturação, muitas vezes, é considerado responsável pela redução da germinação e do vigor de sementes de soja, podendo, desta maneira, ser um método adequado para diferenciar genótipos em função da qualidade de suas sementes. Utilizando-se quatro genótipos do Programa de Melhoramento de Soja do Instituto de Biotecnologia Aplicada à Agropecuária (BIOAGRO/UFV), este trabalho foi conduzido com o objetivo de avaliar se o retardamento de colheita pode ser um método eficiente para a seleção de genótipos com alta qualidade de sementes
Lethal and sublethal toxicities of acetogenin-based bioinsecticides on Ceratitis capitata and the parasitoid Diachasmimorpha longicaudata.
In this study, was evaluated the action lethal and sublethal of three formulations of Annona species extracts (A. mucosa, A. muricata and A. sylvatica) on adults of Ceratitis capitata (Wiedemann, 1852) (Diptera: Tephritidae) and yours parasitoid Diachasmimorpha longicaudata (Ashmead, 1905) (Hymenoptera: Braconidae)
PDBe-KB: collaboratively defining the biological context of structural data
The Protein Data Bank in Europe - Knowledge Base (PDBe-KB, https://pdbe-kb.org) is an open collaboration between world-leading specialist data resources contributing functional and biophysical annotations derived from or relevant to the Protein Data Bank (PDB). The goal of PDBe-KB is to place macromolecular structure data in their biological context by developing standardised data exchange formats and integrating functional annotations from the contributing partner resources into a knowledge graph that can provide valuable biological insights. Since we described PDBe-KB in 2019, there have been significant improvements in the variety of available annotation data sets and user functionality. Here, we provide an overview of the consortium, highlighting the addition of annotations such as predicted covalent binders, phosphorylation sites, effects of mutations on the protein structure and energetic local frustration. In addition, we describe a library of reusable web-based visualisation components and introduce new features such as a bulk download data service and a novel superposition service that generates clusters of superposed protein chains weekly for the whole PDB archive
Equilibrium reconstruction for Single Helical Axis reversed field pinch plasmas
Single Helical Axis (SHAx) configurations are emerging as the natural state
for high current reversed field pinch (RFP) plasmas. These states feature the
presence of transport barriers in the core plasma. Here we present a method for
computing the equilibrium magnetic surfaces for these states in the force-free
approximation, which has been implemented in the SHEq code. The method is based
on the superposition of a zeroth order axisymmetric equilibrium and of a first
order helical perturbation computed according to Newcomb's equation
supplemented with edge magnetic field measurements. The mapping of the measured
electron temperature profiles, soft X-ray emission and interferometric density
measurements on the computed magnetic surfaces demonstrates the quality of the
equilibrium reconstruction. The procedure for computing flux surface averages
is illustrated, and applied to the evaluation of the thermal conductivity
profile. The consistency of the evaluated equilibria with Ohm's law is also
discussed.Comment: Submitted to Plasma Physics and Controlled Fusio
InterPro in 2017-beyond protein family and domain annotations
InterPro (http://www.ebi.ac.uk/interpro/) is a freely available database used to classify protein sequences into families and to predict the presence of important domains and sites. InterProScan is the underlying software that allows both protein and nucleic acid sequences to be searched against InterPro's predictive models, which are provided by its member databases. Here, we report recent developments with InterPro and its associated software, including the addition of two new databases (SFLD and CDD), and the functionality to include residue-level annotation and prediction of intrinsic disorder. These developments enrich the annotations provided by InterPro, increase the overall number of residues annotated and allow more specific functional inferences
PRIMARY HYPERPARATHYROIDISM AND THE PRESENCE OF KIDNEY STONES ARE ASSOCIATED WITH DIFFERENT HAPLOTYPES OF THE CALCIUMSENSINGRECEPTOR
Introduction: Three single-nucleotide polymorphisms in the calcium-sensing receptor gene (CASR) encoding the missense substitutions A986S, R990G, and Q1011E have been associated with normal variation in extracellular calcium homeostasis, both individually and in haplotype combination. The aim of this study was to examine haplotype associations in primary hyperparathyroidism (PHPT). Patients and Methods: Patients with sporadic PHPT (n = 237) were recruited from endocrine clinics and healthy controls (n = 433) from a blood donor clinic, and levels of serum calcium, albumin, and PTH were measured. In PHPT patients, urinary calcium/creatinine clearances and bone mineral density at spine and femoral neck were measured and the presence of kidney stones and vertebral fractures identified. The CASR single-nucleotide polymorphisms were haplotyped by allele-specific sequencing. Results: Four haplotypes (ARQ, SRQ, AGQ, and ARE) of eight were observed, in keeping with significant linkage disequilibrium, but haplotype frequencies did not show significant Hardy-Weinberg disequilibrium. The SRQ haplotype was more common in PHPT (125 of 474 alleles) than in controls (170 of 866 alleles, P = 0.006) and showed a significant (P = 0.006) gene-dosage effect. There was no significant association between haplotype and bone mineral density or fractures, but association with kidney stones was significant (P = 0.0007). In the stone-forming subgroup, the SRQ haplotype was underrepresented and AGQ overrepresented. Patients bearing the AGQ haplotype had an odds ratio of 3.8 (95% confidence interval, 1.30-11.3) for presentation with renal stones compared with the rest. Conclusion: Our data indicate that the CASR SRQ haplotype is significantly associated with PHPT in our population. Within the PHPT patient population, the AGQ haplotype is significantly associated with kidney stones
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