Ten recommendations for reducing the carbon footprint of research computing in human neuroimaging

Given that scientific practices contribute to the climate crisis, scientists should reflect on the planetary impact of their work. Research computing can have a substantial carbon footprint in cases where researchers employ computationally expensive processes with large amounts of data. Analysis of human neuroimaging data, such as Magnetic Resonance Imaging brain scans, is one such case. Here, we consider ten ways in which those who conduct human neuroimaging research can reduce the carbon footprint of their research computing, by making adjustments to the ways in which studies are planned, executed, and analysed; as well as where and how data is stored.</p

Measuring and reducing the carbon footprint of fMRI preprocessing in fMRIPrep

Computationally expensive data processing in neuroimaging research places demands on energy consumption – and the resulting carbon emissions contribute to the climate crisis. We measured the carbon footprint of the fMRI preprocessing tool fMRIPrep, testing the effect of varying parameters on estimated carbon emissions and preprocessing performance. Performance was quantified using (a) statistical individual-level task activation in regions of interest and (b) mean smoothness of preprocessed data. Eight variants of fMRIPrep were run with 257 participants who had completed an fMRI stop signal task (the same data also used in the original validation of fMRIPrep). Some variants led to substantial reductions in carbon emissions without sacrificing data quality: for instance, disabling FreeSurfer surface reconstruction reduced carbon emissions by 48%. We provide six recommendations for minimising emissions without compromising performance. By varying parameters and computational resources, neuroimagers can substantially reduce the carbon footprint of their preprocessing. This is one aspect of our research carbon footprint over which neuroimagers have control and agency to act upon.</p