5 research outputs found
Web services platform for power system development planning
This technical session presentation looks at web services platform for power system development plannin
Web services based distributed dynamic protection system simulation and testing
The paper introduces the idea of using Internet based distributed simulation resources for power system protection studies. The previously developed integrated modelling environment (IME) for protection has been utilised to demonstrate the principle of closed loop multi scheme protection simulation using web services. An example study of two different protection schemes connected to a power system model and performing protection switching sequence simulation is presented. Both the power system model represented alternating transient program (ATP) and protection system model coded in C++ are coordinated by a client software application. The potential benefits of the proposed solution for various customers are outlined in the concluding part of the pape
A common information model (CIM) toolkit framework implemented in Java
The common information model (CIM) is an object-oriented representation of a power system and is used primarily as a data exchange format for power system operational control systems. CIM has the potential to be used as much more than an intermediary exchange language. This paper explores the possible use of CIM as the core of a power systems analytical toolkit for storing, processing, extracting, and exchanging data directly from CIM objects. To this end, this paper discusses solutions to some of the challenges in storing and processing large power system network models as native Java objects without sacrificing reliability and robustness. This paper highlights the advantages provided by such a system when dealing with extensions to the CIM standard and overcoming the problems posed with simultaneously maintaining backward compatibility without sacrificing a higher level of detail. This paper also addresses the issue of data processing performance in contrast to other approaches
The landscape of genomic structural variation in Indigenous Australians
Indigenous Australians harbour rich and unique genomic diversity. However, Aboriginal and Torres Strait Islander ancestries are historically under-represented in genomics research and almost completely missing from reference datasets1-3. Addressing this representation gap is critical, both to advance our understanding of global human genomic diversity and as a prerequisite for ensuring equitable outcomes in genomic medicine. Here we apply population-scale whole-genome long-read sequencing4 to profile genomic structural variation across four remote Indigenous communities. We uncover an abundance of large insertion-deletion variants (20-49 bp; n = 136,797), structural variants (50  b-50 kb; n = 159,912) and regions of variable copy number (>50 kb; n = 156). The majority of variants are composed of tandem repeat or interspersed mobile element sequences (up to 90%) and have not been previously annotated (up to 62%). A large fraction of structural variants appear to be exclusive to Indigenous Australians (12% lower-bound estimate) and most of these are found in only a single community, underscoring the need for broad and deep sampling to achieve a comprehensive catalogue of genomic structural variation across the Australian continent. Finally, we explore short tandem repeats throughout the genome to characterize allelic diversity at 50 known disease loci5, uncover hundreds of novel repeat expansion sites within protein-coding genes, and identify unique patterns of diversity and constraint among short tandem repeat sequences. Our study sheds new light on the dimensions and dynamics of genomic structural variation within and beyond Australia.Andre L. M. Reis, Melissa Rapadas, Jillian M. Hammond, Hasindu Gamaarachchi, Igor Stevanovski, Meutia Ayuputeri Kumaheri, Sanjog R. Chintalaphani, Duminda S. B. Dissanayake, Owen M. Siggs, Alex W. Hewitt, Bastien Llamas, Alex Brown, Gareth Baynam, Graham J. Mann, Brendan J. McMorran, Simon Easteal, Azure Hermes, Misty R. Jenkins, The National Centre for Indigenous Genomics, Hardip R. Patel, Ira W. Deveso
GFP-tagged CFTR transgene is functional in the G551D cystic fibrosis mouse colon
Trafficking of the cystic fibrosis transmembrane conductance regulator (CFTR) is central to its function, with the most common mutation, DeltaF508, resulting in abnormal processing and trafficking. Therefore, there is a significant need to develop tools, which enable the trafficking of CFTR to be studied in vitro and in vivo. In previous studies it has been demonstrated that fusion of the green fluorescent protein (GFP) to the N-terminus of CFTR does lead to functional expression of CFTR chloride channels in epithelial cell lines. The aim of the present study was to examine whether it is possible to express GFP-tagged CFTR as a transgene in colonic and airway epithelial cells of cystic fibrosis (CF) mice and to correct the CF defect. Using the epithelial-specific human cytokeratin promoter K18, we generated bitransgenic mice cftr(G551D/G551D) K18-GFP-CFTR+/-, designated GFP mice. Transcripts for GFP-CFTR could be detected in bitransgenic mice by use of RT-PCR techniques. Expression of GFP-CFTR protein was detected specifically in the colonic epithelium by both direct GFP fluorescence and the use of an anti-GFP antibody. Ussing chamber studies showed that the ion transport defect in colon and airways observed in cftr(G551D/G551D) mice was partially corrected in the bitransgenic animals. Thus, K18-GFP-CFTR is functionally expressed in transgenic mice, which will be a valuable tool in studies on CFTR synthesis, processing and ion transport in native epithelial tissues