Maullinia braseltonii sp. nov. (Rhizaria, Phytomyxea, Phagomyxida) : A Cyst-forming Parasite of the Bull Kelp Durvillaea spp. (Stramenopila, Phaeophyceae, Fucales)

Help in biomass collection by David J. Patiño (UACh), Liliana A. Muñoz (University of Aberdeen (UoA)) and Alexandra Mystikou (South Atlantic Environmental Research Institute & UoA), and in conducting electron microscopy by Gillian Milne (Aberdeen Microscopy Facility) is acknowledged. Thanks are due to the three anonymous reviewers, whose comments helped to improve the earlier version of this manuscript. PM was funded by Conicyt (BecasChile N° 72130422) for PhD studies at the University of Aberdeen, and by the NERC IOF Pump-priming (scheme NE/L013223/1) for activities at the Scottish Association for Marine Sciences. RW thanks financial support from Gobierno Regional de Los Lagos (projects FIC 2012 E7259-2 and FIC 2013 BIP30234872-0) and Fondef, Conicyt (HUAM AQ12I0010), which allows the sampling expeditions at Chiloe Island by David J. Patiño, Liliana Muñoz and PM. SN was funded by the Austrian Science Fund (FWF): grant J3175-B20 (Erwin Schrödinger Fellowship) and grant Y801-B16 (START-grant). PvW is supported by the UoA, BBSRC and NERC. Also, the MASTS pooling initiative (Marine Alliance for Science and Technology for Scotland, funded by the Scottish Funding Council and contributing institutions; grant reference HR09011) is gratefully acknowledged for its support to FCK. Finally, we would like to thank the UoA, Shackleton Fund (FCK) and the John Cheek Fund (FCK) for supporting the expeditions of Alexandra Mystikou, PvW and FCK to the Falkland Islands.Peer reviewedPublisher PD

Subtyping of Swine Influenza Viruses Using a High-Throughput Real-Time PCR Platform

Influenza A viruses (IAVs) are important human and animal pathogens with high impact on human and animal health. In Denmark, a passive surveillance program for IAV in pigs has been performed since 2011, where screening tests and subsequent subtyping are performed by reverse transcription quantitative real-time PCR (RT-qPCR). A disadvantage of the current subtyping system is that several assays are needed to cover the wide range of circulating subtypes, which makes the system expensive and time-consuming. Therefore, the aim of the present study was to develop a high-throughput method, which could improve surveillance of swine influenza viruses (swIAVs) and lower the costs of virus subtyping. Twelve qPCR assays specific for various hemagglutinin and neuraminidase gene lineages relevant for swIAV and six assays specific for the internal genes of IAV were developed and optimized for the high-throughput qPCR platform BioMark (Fluidigm). The qPCR assays were validated and optimized to run under the same reaction conditions using a 48.48 dynamic array (48.48DA). The sensitivity and specificity was assessed by testing virus isolates and field samples with known subtypes. The results revealed a performance of the swIAV 48.48DA similar to conventional real-time analysis, and furthermore, the specificity of swIAV 48.48DA was very high and without cross reactions between the assays. This high-throughput system provides a cost-effective alternative for subtyping of swIAVs

Structure and deformation of the Kermadec forearc in response to subduction of the Pacific oceanic plate

The Tonga-Kermadec forearc is deforming in response to on-going subduction of the Pacific Plate beneath the Indo-Australian Plate. Previous research has focussed on the structural development of the forearc where large bathymetric features such as the Hikurangi Plateau and Louisville Ridge seamount chain are being subducted. Consequently, knowledge of the ‘background’ forearc in regions of normal plate convergence is limited. We report on an ∼250-km-long multichannel seismic reflection profile that was shot perpendicular to the Tonga-Kermadec trench at ∼28°S to determine the lateral and temporal variations in the structure, stratigraphy and deformation of the Kermadec forearc resulting solely from Pacific Plate subduction. Interpretation of the seismic profile, in conjunction with regional swath bathymetry data, shows that the Pacific Plate exhibits horst and graben structures that accommodate bending-induced extensional stresses, generated as the trenchward dip of the crust increases. Trench infill is also much thicker than expected at 1 km which, we propose, results from increased sediment flux into and along the trench. Pervasive normal faulting of the mid-trench slope most likely accommodates the majority of the observed forearc extension in response to basal subduction erosion, and a structural high is located between the mid- and upper-trench slopes. We interpret this high as representing a dense and most likely structurally robust region of crust lying beneath this region. Sediment of the upper-trench slope documents depositional hiatuses and on-going uplift of the arc. Strong along-arc currents appear to erode the Kermadec volcanic arc and distribute this sediment to the surrounding basins, while currents over the forearc redistribute deposits as sediment waves. Minor uplift of the transitional Kermadec forearc, observed just to the north of the profile, appears to relate to an underlying structural trend as well as subduction of the Louisville Ridge seamount chain 250 km to the north. Relative uplift of the Kermadec arc is observed from changes in the tilt of upper-trench slope deposits and extensional faulting of the basement immediately surrounding the Louisville Ridge

Implications of LHC Searches on SUSY Particle Spectra: The pMSSM Parameter Space with Neutralino Dark Matter

We study the implications of LHC searches on SUSY particle spectra using flat scans of the 19-parameter pMSSM phase space. We apply constraints from flavour physics, g_mu-2, dark matter and earlier LEP and Tevatron searches. The sensitivity of the LHC SUSY searches with jets, leptons and missing energy is assessed by reproducing with fast simulation the recent CMS analyses after validation on benchmark points. We present results in terms of the fraction of pMSSM points compatible with all the constraints which are excluded by the LHC searches with 1 fb^{-1} and 15 fb^{-1} as a function of the mass of strongly and weakly interacting SUSY particles. We also discuss the suppression of Higgs production cross sections for the MSSM points not excluded and contrast the region of parameter space tested by the LHC data with the constraints from dark matter direct detection experiments.Comment: 14 pages, 13 figures. v2: increased statistics, to appear in EPJ

Hadronic Contributions to the Muon Anomaly in the Constituent Chiral Quark Model

The hadronic contributions to the anomalous magnetic moment of the muon which are relevant for the confrontation between theory and experiment at the present level of accuracy, are evaluated within the same framework: the constituent chiral quark model. This includes the contributions from the dominant hadronic vacuum polarization as well as from the next--to--leading order hadronic vacuum polarization, the contributions from the hadronic light-by-light scattering, and the contributions from the electroweak hadronic $Z\gamma\gamma$ vertex. They are all evaluated as a function of only one free parameter: the constituent quark mass. We also comment on the comparison between our results and other phenomenological evaluations.Comment: Several misprints corrected and a clarifying sentence added. Three figures superposed and two references added. Version to appear in JHE