4 research outputs found
Additional file 6: Table S5. of Zipper plot: visualizing transcriptional activity of genomic regions
Cancer type and barcode for each sample from TCGA. (XLS 138Â kb
Additional file 1: Methods. of Zipper plot: visualizing transcriptional activity of genomic regions
(PDF 1792Â kb
Additional file 4: Table S3. of Zipper plot: visualizing transcriptional activity of genomic regions
Correspondence between Roadmap Epigenomics names and actual sample types; number of peaks and number of epigenomes available for each case; peak width and peak enrichment distributions across chromosomes for narrow, broad and gapped peaks (for each mark). (XLS 109Â kb
Additional file 5: Table S4. of Zipper plot: visualizing transcriptional activity of genomic regions
Correspondence between FANTOM5 names and actual sample types; number of CAGE-seq peaks per chromosome; peak width and tpm distributions across chromosomes. (XLS 101Â kb