30 research outputs found
Additional file 1: of Cellular origin of the viral capsid-like bacterial microcompartments
Results of the DALI and HHpred searches initiated with the structures of the BMC-H (A) and BMC-P (B) proteins or with the sequence of BMC-P protein (C). (PDF 107 kb
Additional file 1: Table S1. of The complex domain architecture of SAMD9 family proteins, predicted STAND-like NTPases, suggests new links to inflammation and apoptosis
Database search results with the sequences of SAMD9 family members as queries. (DOCX 24 kb
Additional file 2: Figure S1. of The complex domain architecture of SAMD9 family proteins, predicted STAND-like NTPases, suggests new links to inflammation and apoptosis
Sequence logo of the multiple alignment of 208 amino acid sequences from SAMD9 family including metazoan and bacterial species. (PDF 3644 kb
Additional file 3: Table S3. of A census of ÃŽÄ…-helical membrane proteins in double-stranded DNA viruses infecting bacteria and archaea
Virus categories. Description of virus categories and data shown in Figs. 5 and 6. (XLSX 49 kb
Additional file 1: Figure S1. of Evolution of an archaeal virus nucleocapsid protein from the CRISPR-associated Cas4 nuclease
Results of the HHpred search seeded with TP1 (A) and gp7 (B) sequences. H(h), ÃŽÄ…-helix; E(e), ÃŽË›-strand; C(c), coil. (PDF 237 kb
Additional file 2: Table S2. of A census of ÃŽÄ…-helical membrane proteins in double-stranded DNA viruses infecting bacteria and archaea
Conserved TM POGs. Descriptive data for each conserved TM POG, such as viral specificity and number of TM segments. (XLSX 1213 kb
Additional file 1: of Vast diversity of prokaryotic virus genomes encoding double jelly-roll major capsid proteins uncovered by genomic and metagenomic sequence analysis
HHpred search results of conserved proteins of Odin and STIV groups. (ZIP 648 kb
Additional file 3: of A novel group of diverse Polinton-like viruses discovered by metagenome analysis
Multiple alignments of the core genes of the PLV. (PPTX 1221 kb
Additional file 5: of Vast diversity of prokaryotic virus genomes encoding double jelly-roll major capsid proteins uncovered by genomic and metagenomic sequence analysis
DNA polymerase tree. (PPTX 86 kb