Novel Techniques for Constraining Neutron-Capture Rates Relevant for r-Process Heavy-Element Nucleosynthesis

The rapid-neutron capture process ($r$ process) is identified as the producer of about 50\% of elements heavier than iron. This process requires an astrophysical environment with an extremely high neutron flux over a short amount of time ($\sim$ seconds), creating very neutron-rich nuclei that are subsequently transformed to stable nuclei via $\beta^-$ decay. One key ingredient to large-scale $r$-process reaction networks is radiative neutron-capture ($n,\gamma$) rates, for which there exist virtually no data for extremely neutron-rich nuclei involved in the $r$ process. Due to the current status of nuclear-reaction theory and our poor understanding of basic nuclear properties such as level densities and average $\gamma$-decay strengths, theoretically estimated ($n,\gamma$) rates may vary by orders of magnitude and represent a major source of uncertainty in any nuclear-reaction network calculation of $r$-process abundances. In this review, we discuss new approaches to provide information on neutron-capture cross sections and reaction rates relevant to the $r$ process. In particular, we focus on indirect, experimental techniques to measure radiative neutron-capture rates. While direct measurements are not available at present, but could possibly be realized in the future, the indirect approaches present a first step towards constraining neutron-capture rates of importance to the $r$ process.Comment: 62 pages, 24 figures, accepted for publication in Progress in Particle and Nuclear Physic

Geodesic motions versus hydrodynamic flows in a gravitating perfect fluid: Dynamical equivalence and consequences

Stimulated by the methods applied for the observational determination of masses in the central regions of the AGNs, we examine the conditions under which, in the interior of a gravitating perfect fluid source, the geodesic motions and the general relativistic hydrodynamic flows are dynamically equivalent to each other. Dynamical equivalence rests on the functional similarity between the corresponding (covariantly expressed) differential equations of motion and is obtained by conformal transformations. In this case, the spaces of the solutions of these two kinds of motion are isomorphic. In other words, given a solution to the problem "hydrodynamic flow in a perfect fluid", one can always construct a solution formally equivalent to the problem "geodesic motion of a fluid element" and vice versa. Accordingly, we show that, the observationally determined nuclear mass of the AGNs is being overestimated with respect to the real, physical one. We evaluate the corresponding mass-excess and show that it is not always negligible with respect to the mass ofthe central dark object, while, under circumstances, can be even larger than the rest-mass of the circumnuclear gas involved.Comment: LaTeX file, 22 page

Joint modeling of ChIP-seq data via a Markov random field model

Chromatin ImmunoPrecipitation-sequencing (ChIP-seq) experiments have now become routine in biology for the detection of protein-binding sites. In this paper, we present a Markov random field model for the joint analysis of multiple ChIP-seq experiments. The proposed model naturally accounts for spatial dependencies in the data, by assuming first-order Markov dependence and, for the large proportion of zero counts, by using zero-inflated mixture distributions. In contrast to all other available implementations, the model allows for the joint modeling of multiple experiments, by incorporating key aspects of the experimental design. In particular, the model uses the information about replicates and about the different antibodies used in the experiments. An extensive simulation study shows a lower false non-discovery rate for the proposed method, compared with existing methods, at the same false discovery rate. Finally, we present an analysis on real data for the detection of histone modifications of two chromatin modifiers from eight ChIP-seq experiments, including technical replicates with different IP efficiencies

Phylogenetic analysis of strains of Orf virus isolated from two outbreaks of the disease in sheep in Greece

<p>Abstract</p> <p>Background</p> <p>Although orf is endemic around the world, there are few descriptions of <it>Orf virus </it>strains and comparisons of these strains. We report the sequence and phylogenetic analysis of the partial B2L gene of <it>Orf virus </it>from two outbreaks of the disease in Greece. The first was an outbreak of genital form of the disease in a flock imported from France, whilst the second was an outbreak of the disease in the udder skin of ewes and around the mouth of lambs in an indigenous flock.</p> <p>Results</p> <p>Phylogenetic analysis was performed on a part (498 bp) of the B2L gene of 35 <it>Parapoxvirus </it>isolates, including the two <it>Orf virus </it>isolates recovered from each of the two outbreaks in the present study. This analysis revealed that the maximum nucleotide and amino-acid variation amongst <it>Orf virus </it>strains worldwide (n = 33) was 8.1% and 9.6%, respectively. The homology of the nucleotide and amino-acid sequences between the two Greek isolates was 99.0% and 98.8%, respectively. The two Greek isolates clustered only with <it>Orf virus </it>strains.</p> <p>Conclusions</p> <p>We suggest that there can be differences between strains based on their geographical origin. However, differences in the origin of strains or in the clinical presentation of the disease may not be associated with their pathogenicity. More work is required to determine if differing clinical presentations are linked to viral strain differences or if other factors, e.g., flock immunity, method of exposure or genetic susceptibility, are more important to determine the clinical presentation of the infection.</p

Novel technique for constraining r-process (n,γ\gamma) reaction rates

A novel technique has been developed, which will open exciting new opportunities for studying the very neutron-rich nuclei involved in the r-process. As a proof-of-principle, the $\gamma$-spectra from the $\beta$-decay of $^{76}$Ga have been measured with the SuN detector at the National Superconducting Cyclotron Laboratory. The nuclear level density and $\gamma$-ray strength function are extracted and used as input to Hauser-Feshbach calculations. The present technique is shown to strongly constrain the $^{75}$Ge($n,\gamma$)$^{76}$Ge cross section and reaction rate.Comment: 5 pages, 3 figure

Modelling the chemically aged and mixed aerosols over the eastern central Atlantic Ocean – potential impacts

Detailed information on the chemical and physical properties of aerosols is important for assessing their role in air quality and climate. This work explores the origin and fate of continental aerosols transported over the Central Atlantic Ocean, in terms of chemical composition, number and size distribution, using chemistry-transport models, satellite data and in situ measurements. We focus on August 2005, a period with intense hurricane and tropical storm activity over the Atlantic Ocean. A mixture of anthropogenic (sulphates, nitrates), natural (desert dust, sea salt) and chemically aged (sulphate and nitrate on dust) aerosols is found entering the hurricane genesis region, most likely interacting with clouds in the area. Results from our modelling study suggest rather small amounts of accumulation mode desert dust, sea salt and chemically aged dust aerosols in this Atlantic Ocean region. Aerosols of smaller size (Aitken mode) are more abundant in the area and in some occasions sulphates of anthropogenic origin and desert dust are of the same magnitude in terms of number concentrations. Typical aerosol number concentrations are derived for the vertical layers near shallow cloud formation regimes, indicating that the aerosol number concentration can reach several thousand particles per cubic centimetre. The vertical distribution of the aerosols shows that the desert dust particles are often transported near the top of the marine cloud layer as they enter into the region where deep convection is initiated. The anthropogenic sulphate aerosol can be transported within a thick layer and enter the cloud deck through multiple ways (from the top, the base of the cloud, and by entrainment). The sodium (sea salt related) aerosol is mostly found below the cloud base. The results of this work may provide insights relevant for studies that consider aerosol influences on cloud processes and storm development in the Central Atlantic region

Detection of interictal discharges with convolutional neural networks using discrete ordered multichannel intracranial EEG

Detection algorithms for electroencephalography (EEG) data, especially in the field of interictal epileptiform discharge (IED) detection, have traditionally employed handcrafted features which utilised specific characteristics of neural responses. Although these algorithms achieve high accuracy, mere detection of an IED holds little clinical significance. In this work, we consider deep learning for epileptic subjects to accommodate automatic feature generation from intracranial EEG data, while also providing clinical insight. Convolutional neural networks are trained in a subject independent fashion to demonstrate how meaningful features are automatically learned in a hierarchical process. We illustrate how the convolved filters in the deepest layers provide insight towards the different types of IEDs within the group, as confirmed by our expert clinicians. The morphology of the IEDs found in filters can help evaluate the treatment of a patient. To improve the learning of the deep model, moderately different score classes are utilised as opposed to binary IED and non-IED labels. The resulting model achieves state of the art classification performance and is also invariant to time differences between the IEDs. This study suggests that deep learning is suitable for automatic feature generation from intracranial EEG data, while also providing insight into the dat

Screening enhancement factors for laboratory CNO and rp astrophysical reactions

Cross sections of laboratory CNO and rp astrophysical reactions are enhanced due to the presence of the multi-electron cloud that surrounds the target nuclei. As a result the relevant astrophysical factors are overestimated unless corrected appropriately. This study gives both an estimate of the error committed if screening effects are not taken into account and a rough profile of the laboratory energy thresholds at which the screening effect appears. The results indicate that, for most practical purposes, screening corrections to past relevant experiments can be disregarded. Regarding future experiments, however, screening corrections to the CNO reactions will certainly be of importance as they are closely related to the solar neutrino fluxes and the rp process. Moreover, according to the present results, screening effects will have to be taken into account particularly by the current and future LUNA experiments, where screened astrophysical factors will be enhanced to a significant degree.Comment: 6 RevTex pages + 2 ps figures. (Revised version). Accepted for publication in Journal of Physics