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4 research outputs found
RNA-Puzzles toolkit: a computational resource of RNA 3D structure benchmark datasets, structure manipulation, and evaluation tools
Author
Antczak M. (Maciej)
Bujnicki J. (Janusz M)
+8 more
Cao Y. (Yang)
Lukasiak P. (Piotr)
Magnus M. (Marcin)
Miao Z. (Zhichao)
Szachniuk M. (Marta)
Westhof E. (Eric)
Wiedemann J. (Jakub)
Zok T. (Tomasz)
Publication venue
'Oxford University Press (OUP)'
Publication date
24/01/2020
Field of study
Get PDF
univOAK
RNA-Puzzles Round IV:3D structure predictions of four ribozymes and two aptamers
Author
Adamiak Ryszard W.
Antczak Maciej
+48 more
Batey Robert T.
Boniecki Michal J.
Bujnicki Janusz M.
Chen Shi-Jie
Cheng Clarence Yu
Cheng Yi
Chou Fang-Chieh
Das Rhiju
Ding Feng
Dokholyan Nikolay V.
Geniesse Caleb
Golden Barbara L.
Huang Lin
Jiang Yangwei
Joshi Astha
Krokhotin Andrey
Lilley David M.
Liu Yijin
Magnus Marcin
Mailhot Olivier
Major Francois
Mann Thomas H.
Miao Zhichao
Patel Dinshaw J.
Piatkowski Pawel
Pluta Radoslaw
Popenda Mariusz
Ren Aiming
Sarzynska Joanna
Sun Lizhen
Szachniuk Marta
Tian Siqi
Wang Jian
Wang Jun
Watkins Andrew M.
Westhof Eric
Wiedemann Jakub
Xiao Yi
Xu Xiaojun
Yesselman Joseph D.
Zhang Dong
Zhang Yi
Zhang Zhenzhen
Zhao Chenhan
Zhao Peinan
Zhou Yuanzhe
Zok Tomasz
Zyla Adriana
Publication venue
'Cold Spring Harbor Laboratory'
Publication date
05/05/2020
Field of study
Get PDF
univOAK
University of Dundee Online Publications
LCS-TA to identify similar fragments in RNA 3D structures
Author
A Rybarczyk
A Zemla
+29 more
BM Akiyama
D Gudanis
HM Berman
J Blazewicz
J Moult
J Wang
J Wiedemann
JA Cruz
Jakub Wiedemann
JJ Trausch
JS Richardson
KD Pruitt
M Antczak
M Parisien
M Popenda
Maciej Milostan
Marta Szachniuk
MJ Boniecki
N Szostak
NB Suslov
P Lukasiak
P Lukasiak
T Zok
T Zok
Tomasz Zok
VB Chen
X Xu
Y Liu
Z Miao
Publication venue
'Springer Science and Business Media LLC'
Publication date
Field of study
No full text
Crossref
RNA-Puzzles Round III: 3D RNA structure prediction of five riboswitches and one ribozyme
Author
Adrian R. Ferré-D'Amaré
Aiming Ren
+44 more
Alexander J. Becka
Andrey Krokhotin
Arpit Tandon
Benfeard Williams
Caleb Geniesse
Clarence Yu Cheng
Dinshaw J. Patel
Dong Zhang
Eric Westhof
Fang-Chieh Chou
Feng Ding
François Major
Greggory M. Rice
Grzegorz E. Łach
Janusz M. Bujnicki
Jeremiah J. Trausch
Jian Wang
Joanna Sarzynska
John Santalucia
Joseph A. Piccirilli
Kalli Kappel
Katarzyna J. Purzycka
Katarzyna Pachulska-Wieczorek
Kevin M. Weeks
Maciej Antczak
Marcin Biesiada
Marcin Magnus
Mariusz Popenda
Marta Szachniuk
Michał J. Boniecki
Nikolay V. Dokholyan
Rhiju Das
Robert T. Batey
Ryszard W. Adamiak
Shi-Jie Chen
Siqi Tian
Stanisław Dunin-Horkawicz
Thomas H. Mann
Tomasz Zok
Wayne K. Dawson
Wipapat Kladwang
Xiaojun Xu
Yi Xiao
Zhichao Miao
Publication venue
'Cold Spring Harbor Laboratory'
Publication date
Field of study
No full text
Crossref