Multi-microjoule GaSe-based mid-infrared optical parametric amplifier with an ultra-broad idler spectrum covering 4.2-16 {\mu}m

We report a multi-microjoule, ultra-broadband mid-infrared optical parametric amplifier based on a GaSe nonlinear crystal pumped at ~2 {\mu}m. The generated idler pulse has a flat spectrum spanning from 4.5 to 13.3 {\mu}m at -3 dB and 4.2 to 16 {\mu}m in the full spectral range, with a central wavelength of 8.8 {\mu}m. The proposed scheme supports a sub-cycle Fourier-transform-limited pulse width. A (2+1)-dimensional numerical simulation is employed to reproduce the obtained idler spectrum. To our best knowledge, this is the broadest -3 dB spectrum ever obtained by optical parametric amplifiers in this spectral region. The idler pulse energy is ~3.4 {\mu}J with a conversion efficiency of ~2% from the ~2 {\mu}m pump to the idler pulse.Comment: 5 pages, 5 figure

Automated Segmentation of Pulmonary Lobes using Coordination-Guided Deep Neural Networks

The identification of pulmonary lobes is of great importance in disease diagnosis and treatment. A few lung diseases have regional disorders at lobar level. Thus, an accurate segmentation of pulmonary lobes is necessary. In this work, we propose an automated segmentation of pulmonary lobes using coordination-guided deep neural networks from chest CT images. We first employ an automated lung segmentation to extract the lung area from CT image, then exploit volumetric convolutional neural network (V-net) for segmenting the pulmonary lobes. To reduce the misclassification of different lobes, we therefore adopt coordination-guided convolutional layers (CoordConvs) that generate additional feature maps of the positional information of pulmonary lobes. The proposed model is trained and evaluated on a few publicly available datasets and has achieved the state-of-the-art accuracy with a mean Dice coefficient index of 0.947 $\pm$ 0.044.Comment: ISBI 2019 (Oral

Examining Scientific Writing Styles from the Perspective of Linguistic Complexity

Publishing articles in high-impact English journals is difficult for scholars around the world, especially for non-native English-speaking scholars (NNESs), most of whom struggle with proficiency in English. In order to uncover the differences in English scientific writing between native English-speaking scholars (NESs) and NNESs, we collected a large-scale data set containing more than 150,000 full-text articles published in PLoS between 2006 and 2015. We divided these articles into three groups according to the ethnic backgrounds of the first and corresponding authors, obtained by Ethnea, and examined the scientific writing styles in English from a two-fold perspective of linguistic complexity: (1) syntactic complexity, including measurements of sentence length and sentence complexity; and (2) lexical complexity, including measurements of lexical diversity, lexical density, and lexical sophistication. The observations suggest marginal differences between groups in syntactical and lexical complexity.Comment: 6 figure

Ethyl 2-(4-chloro­phenyl)-3-(2,4-di­fluoro­phenoxy)acrylate

In the mol­ecule of the title compound, C17H13ClF2O3, the dihedral angles formed by the aromatic rings of the chloro­benzene and difluoro­benzene groups with the plane of the acrylate unit are 48.85 (12) and 9.07 (14)°, respectively. In the crystal structure, mol­ecules are linked by weak inter­molecular C—H⋯O hydrogen-bond inter­actions, forming chains along the c axis

Diisopropyl­ammonium nitrite

In the title mol­ecular salt, C6H16N+·NO2 −, the cation forms two N—H⋯O hydrogen bonds to nearby nitrite anions which link the ionic units into chains propagating along the b-axis direction

A cell-free system toward deciphering the post-translational modification barcodes of Oct4 in different cellular contexts

AbstractThe octamer-binding transcription factor 4 (Oct4) is essential for maintaining the self-renewal and pluripotency of embryonic stem cells (ESCs). Post-translational modifications (PTMs) of Oct4 critically control its structure, function and intracellular localization. However, determination of Oct4 PTM profiles has largely been restricted by the quantity and purity of the Oct4 protein samples required for mass spectrometric analyses. In this study, by incubating the Escherichia coli-derived His-tagged Oct4 proteins with the whole cell lysates of a variety of human cells followed by retrieving the reacted Oct4 proteins with the Ni–NTA beads, we developed a labor- and cost-effective in vitro PTM method that allowed for mass spectrometric determination of the phosphorylation profiles of Oct4 proteins exposed to various cell-free systems. A number of Oct4 phosphorylation sites that were commonly present in all the cell-free systems or specifically present in a particular cellular context were identified, indicating that Oct4 is controlled by both common and distinct PTM regulatory pathways. Our work provided a proof-of-concept that such a cell-free system-based in vitro PTM approach can be applied to systematically map out the physiologically-relevant PTM sites in Oct4 proteins, which opened up an avenue to fully decipher the Oct4 PTM barcodes in various cellular contexts