Design of multi-plet perfect reconstruction filter banks using frequency-response masking technique

This paper proposes a new design method for a class of two-channel perfect reconstruction (PR) filter banks (FBs) called multi-plet FBs with very sharp cutoff using frequency- response masking (FRM) technique. The multi-plet FBs are PR FBs and their frequency characteristics are controlled by a single subfilter. By recognizing the close relationship between the subfilter and the FRM-based halfband filter, very sharp cutoff PR multi-plet FBs can be realized with reduced implementation complexity. The design procedure is very general and it can be applied to both linear-phase and low-delay PR FBs. Design examples are given to demonstrate the usefulness of the proposed method. © 2008 IEEE.published_or_final_versio

Time-Interleaved Analog-to-Digital Converter (TIADC) Compensation Using Multichannel Filters

Published methods that employ a filter bank for compensating the timing and bandwidth mismatches of an M-channel time-interleaved analog-to-digital converter (TIADC) were developed based on the fact that each sub-ADC channel is a downsampled version of the analog input. The output of each sub-ADC is filtered in such a way that, when all the filter outputs are summed, the aliasing components are minimized. If each channel of the filter bank has N coefficients, the optimization of the coefficients requires computing the inverse of an MN times MN matrix if the weighted least squares (WLS) technique is used as the optimization tool. In this paper, we present a multichannel filtering approach for TIADC mismatch compensation. We apply the generalized sampling theorem to directly estimate the ideal output of each sub-ADC using the outputs of all the sub-ADCs. If the WLS technique is used as the optimization tool, the dimension of the matrix to be inversed is N times N. For the same number of coefficients (and also the same spurious component performance given sufficient arithmetic precision), our technique is computationally less complex and more robust than the filter-bank approach. If mixed integer linear programming is used as the optimization tool to produce filters with coefficient values that are integer powers of two, our technique produces a saving in computing resources by a factor of approximately (100.2N(M- 1)/(M-1) in the TIADC filter design.published_or_final_versio

Growth characteristics and productivity of tall fescue new variety ‘Purumi’ in South Korea

A new tall fescue variety (Festuca arundinacea Schreb.) named ‘Purumi’ was developed by the National Institute of Animal Science, Rural Development Administration, South Korea from 1999 to 2007. For synthetic seed  production of this new variety, 5 superior clones: EFa9108, EFa0010, EFa0020, EFa0108 and EFa0202 were selected and polycrossed. The agronomic growth characteristics and forage production capability of the seeds were studied at Cheonan from 2004 to 2005, and regional trials were conducted in Cheonan, Pyungchang, Jeju and Jinju from 2008 to 2010. Purumi showed enhanced winter hardiness, disease resistance, and regrowth ability as compared to Fawn. The dry matter yield of Purumi was about 5.6% (16.821 kg/ha) higher than that of Fawn. However, the  nutritive value of both varieties was similar. Since this new variety of tall fescue, Purumi has been developed and distributed with its most  remarkable adaptability for Korean climates and superior value as a livestock feed, it is expected to play an important role in restoration of the pasture industry in Korea.Key words: Tall fescue, Purumi, variety, forage, grassland

Over-expression of AtPAP2 in Camelina sativa leads to faster plant growth and higher seed yield

<p>Abstract</p> <p>Background</p> <p>Lipids extracted from seeds of <it>Camelina sativa </it>have been successfully used as a reliable source of aviation biofuels. This biofuel is environmentally friendly because the drought resistance, frost tolerance and low fertilizer requirement of <it>Camelina sativa </it>allow it to grow on marginal lands. Improving the species growth and seed yield by genetic engineering is therefore a target for the biofuels industry. In <it>Arabidopsis</it>, overexpression of purple acid phosphatase 2 encoded by <it>Arabidopsis </it>(<it>AtPAP2</it>) promotes plant growth by modulating carbon metabolism. Overexpression lines bolt earlier and produce 50% more seeds per plant than wild type. In this study, we explored the effects of overexpressing AtPAP2 in <it>Camelina sativa</it>.</p> <p>Results</p> <p>Under controlled environmental conditions, overexpression of AtPAP2 in <it>Camelina sativa </it>resulted in longer hypocotyls, earlier flowering, faster growth rate, higher photosynthetic rate and stomatal conductance, increased seed yield and seed size in comparison with the wild-type line and null-lines. Similar to transgenic <it>Arabidopsis</it>, activity of sucrose phosphate synthase in leaves of transgenic <it>Camelina </it>was also significantly up-regulated. Sucrose produced in photosynthetic tissues supplies the building blocks for cellulose, starch and lipids for growth and fuel for anabolic metabolism. Changes in carbon flow and sink/source activities in transgenic lines may affect floral, architectural, and reproductive traits of plants.</p> <p>Conclusions</p> <p>Lipids extracted from the seeds of <it>Camelina sativa </it>have been used as a major constituent of aviation biofuels. The improved growth rate and seed yield of transgenic <it>Camelina </it>under controlled environmental conditions have the potential to boost oil yield on an area basis in field conditions and thus make <it>Camelina</it>-based biofuels more environmentally friendly and economically attractive.</p

A dual protein expression system in Bacillus subtilis

We have developed a dual expression system for the simultaneous overexpression of two proteins in Bacillus subtilis. Two candidate genes, xylanase (xynA) and glucanase (bglS) from B. subtilis strain 168, which were engineered with independent Shine-Dalgarno (SD) sequences, were cloned in tandem into a transfer vector, which was then transformed into B. subtilis strain 1A304 (φ105MU331). The genes were under the transcriptional control of a strong promoter of a bacteriophage, φ105, where transcription was initiated upon thermal induction. Six constructs were made to compare the factors that affected the yields of the gene products. The expression level of each candidate gene was found to correspond to its position relative to the phage promoter, irrespective of the identity of the insert. The lower expression level of the second insert might have been due to limited resources for protein synthesis, a short half-life of the mRNA, or an early termination of the RNA polymerase. Curiously, gene duplications in tandem did not lead to further increase in production. © 2002 Elsevier Science (USA). All rights reserved.postprin

Valley Polarization Enhancement Induced by a Single Chiral Nanoparticle

Valley polarization is amongst the most critical attributes of atomically thin materials. However, achieving a high contrast from monolayer transition metal dichalcogenides (TMDs) has so far been challenging. In this work, a giant valley polarization contrast up to 45% from a monolayer WS2 has been achieved at room temperature by using a single chiral plasmonic nanoparticle. The increased contrast is attributed to the selective enhancement of both the excitation and the emission rate having one particular handedness of the circular polarization. The experimental results were corroborated by the optical simulation using finite-difference time-domain (FDTD) method. Additionally, the single chiral nanoparticle enabled the observation of valley-polarized luminescence with a linear excitation. Our results provide a promising pathway to enhance valley contrast from monolayer TMDs and utilize them for nanophotonic devices

ALS monocyte-derived microglia-like cells reveal cytoplasmic TDP-43 accumulation, DNA damage, and cell-specific impairment of phagocytosis associated with disease progression

Background: Amyotrophic lateral sclerosis (ALS) is a multifactorial neurodegenerative disease characterised by the loss of upper and lower motor neurons. Increasing evidence indicates that neuroinflammation mediated by microglia contributes to ALS pathogenesis. This microglial activation is evident in post-mortem brain tissues and neuroimaging data from patients with ALS. However, the role of microglia in the pathogenesis and progression of amyotrophic lateral sclerosis remains unclear, partly due to the lack of a model system that is able to faithfully recapitulate the clinical pathology of ALS. To address this shortcoming, we describe an approach that generates monocyte-derived microglia-like cells that are capable of expressing molecular markers, and functional characteristics similar to in vivo human brain microglia. Methods: In this study, we have established monocyte-derived microglia-like cells from 30 sporadic patients with ALS, including 15 patients with slow disease progression, 6 with intermediate progression, and 9 with rapid progression, together with 20 non-affected healthy controls. Results: We demonstrate that patient monocyte-derived microglia-like cells recapitulate canonical pathological features of ALS including non-phosphorylated and phosphorylated-TDP-43-positive inclusions. Moreover, ALS microglia-like cells showed significantly impaired phagocytosis, altered cytokine profiles, and abnormal morphologies consistent with a neuroinflammatory phenotype. Interestingly, all ALS microglia-like cells showed abnormal phagocytosis consistent with the progression of the disease. In-depth analysis of ALS microglia-like cells from the rapid disease progression cohort revealed significantly altered cell-specific variation in phagocytic function. In addition, DNA damage and NOD-leucine rich repeat and pyrin containing protein 3 (NLRP3) inflammasome activity were also elevated in ALS patient monocyte-derived microglia-like cells, indicating a potential new pathway involved in driving disease progression. Conclusions: Taken together, our work demonstrates that the monocyte-derived microglia-like cell model recapitulates disease-specific hallmarks and characteristics that substantiate patient heterogeneity associated with disease subgroups. Thus, monocyte-derived microglia-like cells are highly applicable to monitor disease progression and can be applied as a functional readout in clinical trials for anti-neuroinflammatory agents, providing a basis for personalised treatment for patients with ALS

Generation and physiological roles of linear ubiquitin chains

Ubiquitination now ranks with phosphorylation as one of the best-studied post-translational modifications of proteins with broad regulatory roles across all of biology. Ubiquitination usually involves the addition of ubiquitin chains to target protein molecules, and these may be of eight different types, seven of which involve the linkage of one of the seven internal lysine (K) residues in one ubiquitin molecule to the carboxy-terminal diglycine of the next. In the eighth, the so-called linear ubiquitin chains, the linkage is between the amino-terminal amino group of methionine on a ubiquitin that is conjugated with a target protein and the carboxy-terminal carboxy group of the incoming ubiquitin. Physiological roles are well established for K48-linked chains, which are essential for signaling proteasomal degradation of proteins, and for K63-linked chains, which play a part in recruitment of DNA repair enzymes, cell signaling and endocytosis. We focus here on linear ubiquitin chains, how they are assembled, and how three different avenues of research have indicated physiological roles for linear ubiquitination in innate and adaptive immunity and suppression of inflammation