34,278 research outputs found
Why not Merge the International Monetary Fund (IMF) with the International Bank for Reconstruction and Development (World Bank)
Motivation: Cellular Electron CryoTomography (CECT) is an emerging 3D imaging technique that visualizes subcellular organization of single cells at sub-molecular resolution and in near-native state. CECT captures large numbers of macromolecular complexes of highly diverse structures and abundances. However, the structural complexity and imaging limits complicate the systematic de novo structural recovery and recognition of these macromolecular complexes. Efficient and accurate reference-free subtomogram averaging and classification represent the most critical tasks for such analysis. Existing subtomogram alignment based methods are prone to the missing wedge effects and low signal-to-noise ratio (SNR). Moreover, existing maximum-likelihood based methods rely on integration operations, which are in principle computationally infeasible for accurate calculation. Results: Built on existing works, we propose an integrated method, Fast Alignment Maximum Likelihood method (FAML), which uses fast subtomogram alignment to sample sub-optimal rigid transformations. The transformations are then used to approximate integrals for maximum-likelihood update of subtomogram averages through expectation-maximization algorithm. Our tests on simulated and experimental subtomograms showed that, compared to our previously developed fast alignment method (FA), FAML is significantly more robust to noise and missing wedge effects with moderate increases of computation cost. Besides, FAML performs well with significantly fewer input subtomograms when the FA method fails. Therefore, FAML can serve as a key component for improved construction of initial structuralmodels frommacromolecules captured by CECT
The generalized Kupershmidt deformation for constructing new integrable systems from integrable bi-Hamiltonian systems
Based on the Kupershmidt deformation for any integrable bi-Hamiltonian
systems presented in [4], we propose the generalized Kupershmidt deformation to
construct new systems from integrable bi-Hamiltonian systems, which provides a
nonholonomic perturbation of the bi-Hamiltonian systems. The generalized
Kupershmidt deformation is conjectured to preserve integrability. The
conjecture is verified in a few representative cases: KdV equation, Boussinesq
equation, Jaulent-Miodek equation and Camassa-Holm equation. For these specific
cases, we present a general procedure to convert the generalized Kupershmidt
deformation into the integrable Rosochatius deformation of soliton equation
with self-consistent sources, then to transform it into a -type
bi-Hamiltonian system. By using this generalized Kupershmidt deformation some
new integrable systems are derived. In fact, this generalized Kupershmidt
deformation also provides a new method to construct the integrable Rosochatius
deformation of soliton equation with self-consistent sources.Comment: 21 pages, to appear in Journal of Mathematical Physic
Compact and High Performance Dual-band Bandpass Filter Using Resonator-embedded Scheme for WLANs
A compact microstrip dual-band bandpass filter (DBBPF) with high selectivity and good suppression for wireless local area networks (WLANs) is proposed utilizing a novel embedded scheme resonator. Two passbands are produced by a pair of embedded half-wavelength meandered stepped-impedance resonator (MSIR) and a quadwavelength short stub loaded stepped-impedance resonator (SIR) separately. The resonator is fed by folded Tshaped capacitive source-load coupling microstrip feed line, and four transmission zeros are obtained at both sides of the bands to improve selectivity and suppression. Simultaneously, the size of the filter is extermely compact because embedding half-wavelength MSIR only changes the interior configuration of quad-wavelength SIR. To validate the design method, the designed filter is fabricated and measured. Both simulated and measured results indicate that good transmission property has been achieved
On the Toda Lattice Equation with Self-Consistent Sources
The Toda lattice hierarchy with self-consistent sources and their Lax
representation are derived. We construct a forward Darboux transformation (FDT)
with arbitrary functions of time and a generalized forward Darboux
transformation (GFDT) for Toda lattice with self-consistent sources (TLSCS),
which can serve as a non-auto-Backlund transformation between TLSCS with
different degrees of sources. With the help of such DT, we can construct many
type of solutions to TLSCS, such as rational solution, solitons, positons,
negetons, and soliton-positons, soliton-negatons, positon-negatons etc., and
study properties and interactions of these solutions.Comment: 20 page
Identification of nonlinear lateral flow immunoassay state-space models via particle filter approach
This is the post-print of the Article. The official published version can be accessed from the link below - Copyright @ 2012 IEEEIn this paper, the particle filtering approach is used, together with the kernel smoothing method, to identify the state-space model for the lateral flow immunoassay through available but short time-series measurement. The lateral flow immunoassay model is viewed as a nonlinear dynamic stochastic model consisting of the equations for the biochemical reaction system as well as the measurement output. The renowned extended Kalman filter is chosen as the importance density of the particle filter for the purpose of modeling the nonlinear lateral flow immunoassay. By using the developed particle filter, both the states and parameters of the nonlinear state-space model can be identified simultaneously. The identified model is of fundamental significance for the development of lateral flow immunoassay quantification. It is shown that the proposed particle filtering approach works well for modeling the lateral flow immunoassay.This work was supported in part by the International Science and Technology
Cooperation Project of China under Grant 2009DFA32050, Natural Science Foundation of China under Grants 61104041, International Science and Technology Cooperation Project of Fujian Province of China under Grant
2009I0016
A hybrid EKF and switching PSO algorithm for joint state and parameter estimation of lateral flow immunoassay models
This is the post-print version of the Article. The official published can be accessed from the link below - Copyright @ 2012 IEEEIn this paper, a hybrid extended Kalman filter (EKF) and switching particle swarm optimization (SPSO) algorithm is proposed for jointly estimating both the parameters and states of the lateral flow immunoassay model through available short time-series measurement. Our proposed method generalizes the well-known EKF algorithm by imposing physical constraints on the system states. Note that the state constraints are encountered very often in practice that give rise to considerable difficulties in system analysis and design. The main purpose of this paper is to handle the dynamic modeling problem with state constraints by combining the extended Kalman filtering and constrained optimization algorithms via the maximization probability method. More specifically, a recently developed SPSO algorithm is used to cope with the constrained optimization problem by converting it into an unconstrained optimization one through adding a penalty term to the objective function. The proposed algorithm is then employed to simultaneously identify the parameters and states of a lateral flow immunoassay model. It is shown that the proposed algorithm gives much improved performance over the traditional EKF method.This work was supported in part by the International Science and Technology Cooperation Project of China under Grant
2009DFA32050, Natural Science Foundation of China under Grants 61104041, International Science and Technology Cooperation Project of Fujian Province of China under Grant
2009I0016
Inference of nonlinear state-space models for sandwich-type lateral flow immunoassay using extended Kalman filtering
Copyright [2011] IEEE. This material is posted here with permission of the IEEE. Such permission of the IEEE does not in any way imply IEEE endorsement of any of Brunel University's products or services. Internal or personal use of this material is permitted. However, permission to reprint/republish this material for advertising or promotional purposes or for creating new collective works for resale or redistribution must be obtained from the IEEE by writing to [email protected].
By choosing to view this document, you agree to all provisions of the copyright laws protecting it.In this paper, a mathematical model for sandwichtype lateral flow immunoassay is developed via short available time series. A nonlinear dynamic stochastic model is considered that consists of the biochemical reaction system equations and the observation equation. After specifying the model structure, we apply the extend Kalman filter (EKF) algorithm for identifying both the states and parameters of the nonlinear state-space model. It is shown that the EKF algorithm can accurately identify the parameters and also predict the system states in the nonlinear dynamic stochastic model through an iterative procedure by using a small number of observations. The identified mathematical model provides a powerful tool for testing the system hypotheses and also inspecting the effects from various design parameters in a both rapid and inexpensive way. Furthermore, by means of the established model, the dynamic changes of the concentration of antigens and antibodies can be predicted, thereby making it possible for us to analyze, optimize and design the properties of lateral flow immunoassay devices.This work was supported in part by the International Science and Technology
Cooperation Project of China under Grant 2009DFA32050, Natural Science Foundation of Fujian Province of China under Grants 2009J01280 and 2009J01281
B\"{a}cklund transformations for high-order constrained flows of the AKNS hierarchy: canonicity and spectrality property
New infinite number of one- and two-point B\"{a}cklund transformations (BTs)
with explicit expressions are constructed for the high-order constrained flows
of the AKNS hierarchy. It is shown that these BTs are canonical transformations
including B\"{a}cklund parameter and a spectrality property holds with
respect to and the 'conjugated' variable for which the point
belongs to the spectral curve. Also the formulas of m-times
repeated Darboux transformations for the high-order constrained flows of the
AKNS hierarchy are presented.Comment: 21 pages, Latex, to be published in J. Phys.
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