50 research outputs found
MicroRNAome of Porcine Pre- and Postnatal Development
The domestic pig is of enormous agricultural significance and valuable models for many human diseases. Information concerning the pig microRNAome (miRNAome) has been long overdue and elucidation of this information will permit an atlas of microRNA (miRNA) regulation functions and networks to be constructed. Here we performed a comprehensive search for porcine miRNAs on ten small RNA sequencing libraries prepared from a mixture of tissues obtained during the entire pig lifetime, from the fetal period through adulthood. The sequencing results were analyzed using mammalian miRNAs, the precursor hairpins (pre-miRNAs) and the first release of the high-coverage porcine genome assembly (Sscrofa9, April 2009) and the available expressed sequence tag (EST) sequences. Our results extend the repertoire of pig miRNAome to 867 pre-miRNAs (623 with genomic coordinates) encoding for 1,004 miRNAs, of which 777 are unique. We preformed real-time quantitative PCR (q-PCR) experiments for selected 30 miRNAs in 47 tissue-specific samples and found agreement between the sequencing and q-PCR data. This broad survey provides detailed information about multiple variants of mature sequences, precursors, chromosomal organization, development-specific expression, and conservation patterns. Our data mining produced a broad view of the pig miRNAome, consisting of miRNAs and isomiRs and a wealth of information of pig miRNA characteristics. These results are prelude to the advancement in pig biology as well the use of pigs as model organism for human biological and biomedical studies
Quantitative evaluation of the immunodeficiency of a mouse strain by tumor engraftments
ΓΒ© 2015 Ye et al. Background: The mouse is an organism that is widely used as a mammalian model for studying human physiology or disease, and the development of immunodeficient mice has provided a valuable tool for basic and applied human disease research. Following the development of large-scale mouse knockout programs and genome-editing tools, it has become increasingly efficient to generate genetically modified mouse strains with immunodeficiency. However, due to the lack of a standardized system for evaluating the immuno-capacity that prevents tumor progression in mice, an objective choice of the appropriate immunodeficient mouse strains to be used for tumor engrafting experiments is difficult. Methods: In this study, we developed a tumor engraftment index (TEI) to quantify the immunodeficiency response to hematologic malignant cells and solid tumor cells of six immunodeficient mouse strains and C57BL/6 wild-type mouse (WT). Results: Mice with a more severely impaired immune system attained a higher TEI score. We then validated that the NOD-scid-IL2Rg-/- (NSI) mice, which had the highest TEI score, were more suitable for xenograft and allograft experiments using multiple functional assays. Conclusions: The TEI score was effectively able to reflect the immunodeficiency of a mouse strain.Link_to_subscribed_fulltex
New natural barrigenol-like triterpenoid isolated from the husks of Xanthoceras sorbifolia
Re-gendering Chinese history: Zhao Mei's Emperor Wu Zetian
Historians who share the written Chinese language as a carrier of cultural signification have negotiated the image of female emperor Wu Zetian with the signs of the times designated by the needs of the present. The female writer Zhao Mei's new biography Woman: Wu Zetian deconstructs the historical and cultural representation of Wu Zetian as the 'bad unwoman'; links a woman's private, and subjective experiences with her public and political activities; and demonstrates that how the former influences the latter. This paper examines how the participation of contemporary biographers in knowledge production constructs, legitimises and maintains the image of Wu Zetian as a woman and a ruler. It argues that Zhao Mei's biography of Wu Zetian manages to confront the established dominance of male hierarchy, questions the 'stigmatised identity' of this historical character as being stable and universal and, consequently re-genders an important chapter in Chinese history.Xianlin Son