659 research outputs found

    Evaluation of Dredged Material Proposed for Ocean Disposal from Port Chester, New York

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    Port Chester was one of seven waterways that the US Army Corps of Engineers-New York District requested the Battelle Marine Sciences Laboratory to sample and evaluate for dredging and disposal in March 1994. Tests and analyses were conducted on Port Chester sediment core samples. Because the Port Chester area is located on the border between New York and southeast Connecticut, its dredged material may also be considered for disposal at the Central Long Island Sound Disposal Site. The sediment evaluation consisted of bulk sediment chemical analyses, chemical analyses of site water and dredged material elutriate preparations, water-column and benthic acute toxicity tests, and bioaccumulation studies. Individual sediment core samples collected from Port Chester were analyzed for grain size, moisture content, and total organic carbon. In addition, sediment was analyzed for bulk density, specific gravity, metals, chlorinated pesticides, polychlorinated biphenyl congers, polynuclear aromatic hydrocarbons and 1,4-dichlorobenzene

    How birds cope physiologically and behaviourally with extreme climatic events

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    As global climate change progresses, the occurrence of potentially disruptiveclimatic events such as storms are increasing in frequency, duration and inten-sity resulting in higher mortality and reduced reproductive success. Whatconstitutes an extreme climatic event? First we point out that extreme climaticevents in biological contexts can occur in any environment. Focusing on fieldand laboratory data on wild birds we propose a mechanistic approach to defin-ing and investigating what extreme climatic events are and how animals copewith them at physiological and behavioural levels. The life cycle of birds ismade up of life-history stages such as migration, breeding and moult thatevolved to match a range of environmental conditions an individual mightexpect during the year. When environmental conditions deteriorate anddeviate from the expected range then the individual must trigger copingmechanisms (emergency life-history stage) that will disrupt the temporal pro-gression of life-history stages, but enhance survival. Using the framework ofallostasis, we argue that an extreme climatic event in biological contexts canbe defined as when the cumulative resources available to an individual areexceeded by the sum of its energetic costs—a state called allostatic overload.This allostatic overload triggers the emergency life-history stage that tempor-arily allows the individual to cease regular activities in an attempt to surviveextreme conditions. We propose that glucocorticoid hormones play a majorrole in orchestrating coping mechanisms and are critical for enduring extremeclimatic events.This article is part of the themed issue ‘Behavioural, ecological andevolutionary responses to extreme climatic events’

    Theory for Phase Transitions in Insulating Vanadium Oxide

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    We show that the recently proposed S=2 bond model with orbital degrees of freedom for insulating V2_{2}O3_{3} not only explains the anomalous magnetic ordering, but also other mysteries of the magnetic phase transition. The model contains an additional orbital degree of freedom that exhibits a zero temperature quantum phase transtion in the Ising universality class.Comment: 5 pages, 2 figure

    Experimental library screening demonstrates the successful application of computational protein design to large structural ensembles

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    The stability, activity, and solubility of a protein sequence are determined by a delicate balance of molecular interactions in a variety of conformational states. Even so, most computational protein design methods model sequences in the context of a single native conformation. Simulations that model the native state as an ensemble have been mostly neglected due to the lack of sufficiently powerful optimization algorithms for multistate design. Here, we have applied our multistate design algorithm to study the potential utility of various forms of input structural data for design. To facilitate a more thorough analysis, we developed new methods for the design and high-throughput stability determination of combinatorial mutation libraries based on protein design calculations. The application of these methods to the core design of a small model system produced many variants with improved thermodynamic stability and showed that multistate design methods can be readily applied to large structural ensembles. We found that exhaustive screening of our designed libraries helped to clarify several sources of simulation error that would have otherwise been difficult to ascertain. Interestingly, the lack of correlation between our simulated and experimentally measured stability values shows clearly that a design procedure need not reproduce experimental data exactly to achieve success. This surprising result suggests potentially fruitful directions for the improvement of computational protein design technology

    Ground State and Excitations of Spin Chain with Orbital Degeneracy

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    The one dimensional Heisenberg model in the presence of orbital degeneracy is studied at the SU(4) symmetric viewpoint by means of Bethe ansatz. Following Sutherland's previous work on an equivalent model, we discuss the ground state and the low-lying excitations more extensively in connection to the spin systems with orbital degeneracy. We show explicitly that the ground state is a SU(4) singlet. We study the degeneracies of the elementary excitations and the spectra of the generalized magnons consisting of these excitations. We also discuss the complex 2-strings in the context of the Bethe ansatz solutions.Comment: Revtex, 9 pages, 3 figures; typos correcte

    Orbitally Degenerate Spin-1 Model for Insulating V2O3

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    Motivated by recent neutron, X-ray absorption and resonant scattering experiments, we revisit the electronic structure of V2O3. We propose a model in which S=1 V3+ ions are coupled in the vertical V-V pairs forming two-fold orbitally degenerate configurations with S=2. Ferro-orbital ordering of the V-V pairs gives a description which is consistent with all experiments in the antiferromagnetic insulating phase.Comment: 4 pages, including three figure
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