Metabolite profiles of ginsenosides Rk1 and Rg5 in zebrafish using ultraperformance liquid chromatography/quadrupole–time-of-flight MS

AbstractBackgroundIn the present study, metabolite profiles of ginsenosides Rk1 and Rg5 from red ginseng or red notoginseng in zebrafish were qualitatively analyzed with ultraperformance liquid chromatography/quadrupole–time-of-flight MS, and the possible metabolic were pathways proposed.MethodsAfter exposing to zebrafish for 24 h, we determined the metabolites of ginsenosides Rk1 and Rg5. The chromatography was accomplished on UPLC BEH C18 column using a binary gradient elution of 0.1% formic acetonitrile–0.1% formic acid water. The quasimolecular ions of compounds were analyzed in the negative mode. With reference to quasimolecular ions and MS2 spectra, by comparing with reference standards and matching the empirical molecular formula with that of known published compounds, and then the potential structures of metabolites of ginsenosides Rk1 and Rg5 were acquired.ResultsFour and seven metabolites of ginsenoside Rk1 and ginsenoside Rg5, respectively, were identified in zebrafish. The mechanisms involved were further deduced to be desugarization, glucuronidation, sulfation, and dehydroxymethylation pathways. Dehydroxylation and loss of C-17 residue were also metabolic pathways of ginsenoside Rg5 in zebrafish.ConclusionLoss of glucose at position C-3 and glucuronidation at position C-12 in zebrafish were regarded as the primary physiological processes of ginsenosides Rk1 and Rg5

Tgif1 Counterbalances The Activity Of Core Pluripotency Factors In Mouse Embryonic Stem Cells

Core pluripotency factors, such as Oct4, Sox2, and Nanog, play important roles in maintaining embryonic stem cell (ESC) identity by autoregulatory feedforward loops. Nevertheless, the mechanism that provides precise control of the levels of the ESC core factors without indefinite amplification has remained elusive. Here, we report the direct repression of core pluripotency factors by Tgif1, a previously known terminal repressor of TGF beta/activin/nodal signaling. Overexpression of Tgif1 reduces the levels of ESC core factors, whereas its depletion leads to the induction of the pluripotency factors. We confirm the existence of physical associations between Tgif1 and Oct4, Nanog, and HDAC1/2 and further show the level of Tgif1 is not significantly altered by treatment with an activator/inhibitor of the TGF beta/activin/nodal signaling. Collectively, our findings establish Tgif1 as an integral member of the core regulatory circuitry of mouse ESCs that counterbalances the levels of the core pluripotency factors in a TGF beta/activin/nodal-independent manner.Cancer Prevention Research Institute of Texas (CPRIT) R1106Molecular Bioscience

The Regulation of Leptin, Leptin Receptor and Pro-opiomelanocortin Expression by N-3 PUFAs in Diet-Induced Obese Mice Is Not Related to the Methylation of Their Promoters

<p>Abstract</p> <p>Background</p> <p>The expression of leptin is increased in obesity and inhibited by n-3 polyunsaturated fatty acids (n-3 PUFAs), but the underlying molecular mechanisms have not been firmly established.</p> <p>Methods</p> <p>In this study, we investigated the effects of dietary n-3 PUFAs on the methylation of CpG islands in the promoter regions of the leptin, leptin-R and POMC genes, as well as the effects of n-3 PUFA status in early life on the modification of the promoters of these three genes. Male C57 BL/6J mice were fed a high-fat diet with one of four different fat types: sunflower oil (n-3 PUFA deficient), soy oil, fish oil, or a mixture of soy and fish oil (soy:fish oil = 1:1). Two low-fat diets with sunflower oil or soy oil served as controls. Female mice were fed two breeding diets, sunflower oil or a mixture of soy and fish oil (soy:fish oil = 1:1), during pregnancy and lactation to breed new pups.</p> <p>Results</p> <p>Compared to mice fed the control diets, the expression of leptin in fat tissue and leptin-R and POMC in the hypothalamus was higher in the diet-induced obesity (DIO) mice, and the n-3 PUFAs in the diets reversed these elevated expression levels. The mean methylation levels of CpG sites in the promoter regions of the leptin and POMC genes showed no difference between the DIO and the control diet groups nor between the n-3 PUFA-containing and -deficient diet groups. For the CpG sites in the promoter regions of leptin-R, no methylation was found in any of the DIO or control groups. Feeding mice with the n-3 PUFA diet during pregnancy and lactation did not affect CpG methylation in the leptin or POMC promoters.</p> <p>Conclusions</p> <p>Our findings indicate that promoter DNA methylation may not be related to the expression of leptin, leptin-R or its related hypothalamic satiety regulator POMC.</p

Precise Facial Landmark Detection by Reference Heatmap Transformer

Most facial landmark detection methods predict landmarks by mapping the input facial appearance features to landmark heatmaps and have achieved promising results. However, when the face image is suffering from large poses, heavy occlusions and complicated illuminations, they cannot learn discriminative feature representations and effective facial shape constraints, nor can they accurately predict the value of each element in the landmark heatmap, limiting their detection accuracy. To address this problem, we propose a novel Reference Heatmap Transformer (RHT) by introducing reference heatmap information for more precise facial landmark detection. The proposed RHT consists of a Soft Transformation Module (STM) and a Hard Transformation Module (HTM), which can cooperate with each other to encourage the accurate transformation of the reference heatmap information and facial shape constraints. Then, a Multi-Scale Feature Fusion Module (MSFFM) is proposed to fuse the transformed heatmap features and the semantic features learned from the original face images to enhance feature representations for producing more accurate target heatmaps. To the best of our knowledge, this is the first study to explore how to enhance facial landmark detection by transforming the reference heatmap information. The experimental results from challenging benchmark datasets demonstrate that our proposed method outperforms the state-of-the-art methods in the literature.Comment: Accepted by IEEE Transactions on Image Processing, March 202

The correlations between optical variability and physical parameters of quasars in SDSS Stripe 82

We investigate the optical variability of 7658 quasars from SDSS Stripe 82. Taking advantage of a larger sample and relatively more data points for each quasar, we estimate variability amplitudes and divide the sample into small bins of redshift, rest-frame wavelength, black hole mass, Eddington ratio and bolometric luminosity respectively, to investigate the relationships between variability and these parameters. An anti-correlation between variability and rest-frame wavelength is found. The variability amplitude of radio-quiet quasars shows almost no cosmological evolution, but that of radio-loud ones may weakly anti-correlate with redshift. In addition, variability increases as either luminosity or Eddington ratio decreases. However, the relationship between variability and black hole mass is uncertain; it is negative when the influence of Eddington ratio is excluded, but positive when the influence of luminosity is excluded. The intrinsic distribution of variability amplitudes for radio-loud and radio-quiet quasars are different. Both radio-loud and radio-quiet quasars exhibit a bluer-when-brighter chromatism. Assuming that quasar variability is caused by variations of accretion rate, the Shakura-Sunyaev disk model can reproduce the tendencies of observed correlations between variability and rest-frame wavelength, luminosity as well as Eddington ratio, supporting that changes of accretion rate plays an important role in producing the observed optical variability. However, the predicted positive correlation between variability and black hole mass seems to be inconsistent with the observed negative correlation between them in small bins of Eddington ratio, which suggests that other physical mechanisms may still need to be considered in modifying the simple accretion disk model.Comment: 51 pages, 28 figures, 2 tables, ApJ accepte

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Official Reports of the Town of Wayland for Its One Hundred and Forty-Third Municipal Year From January 1,1922 To January 1, 1923

We study the relation between the metallicity of quasar broad line region (BLR) and black hole (BH) mass (10(7.5)-10(10) M-circle dot) and quasar bolometric luminosity (10(44.6)-10(48) erg s(-1)) using a sample of similar to 130000 quasars at 2.25 &lt;= z &lt;= 5.25 from Sloan Digital Sky Survey Data Release 12 (DR12). We generate composite spectra by stacking individual spectra in the same BH mass (bolometric luminosity) and redshift bins and then estimate the metallicity of quasar BLR using metallicity-sensitive broad emission-line flux ratios based on the photoionization models. We find a significant correlation between quasar BLR metallicity and BH mass (bolometric luminosity) but no correlation between quasar BLR metallicity and redshift. We also compare the metallicity of quasar BLR and that of host galaxies inferred from the mass metallicity relation of star-forming galaxy at z similar to 2.3 and 3.5. We find quasar BLR metallicity is 0.3 similar to 1.0 dex higher than their host galaxies. This discrepancy cannot be interpreted by the uncertainty due to different metallicity diagnostic methods, mass metallicity relation of galaxy, metallicity gradient in quasar host galaxies, BH mass estimation, the effect of different spectral energy distribution models, and a few other potential sources of uncertainties. We propose a possibility that the high metallicity in quasar BLR might be caused by metal enrichment from massive star formation in the nucleus region of quasars or even the accretion disc