7 research outputs found
Impact of library preparation protocols and template quantity on the metagenomic reconstruction of a mock microbial community
- Author
- A Adey
- AE Minoche
- Alicia Clum
- AM Womack
- B Jiang
- CA Hutchison
- CFa de Bourcy
- Chew Yee Ngan
- D Aird
- Doina Ciobanu
- G Biesbroek
- GGZ Silva
- H Yokouchi
- Hope Tice
- I Kozarewa
- J Martínez Martínez
- Jan-Fang Cheng
- JG Caporaso
- Joanne Lim
- Kanwar Singh
- M Scholz
- MB Duhaime
- R Li
- R Marine
- RM Bowers
- Robert M. Bowers
- RW Lusk
- S Boisvert
- S Weiss
- S Yilmaz
- SA Solonenko
- SJ Salter
- SP Jungbluth
- ST Kelley
- Susannah G. Tringe
- T Namiki
- T Thomas
- Tanja Woyke
- WAM Hoeijmakers
- Y Benjamini
- Y Peng
- Publication venue
- 'Springer Science and Business Media LLC'
- Publication date
- Field of study
Enhanced Methylation Analysis by Recovery of Unsequenceable Fragments
- Author
- AP Gupta
- AR Quinlan
- CJ Merrick
- D Aird
- D Zhang
- D. L. Doolan
- Dario Beraldi
- E Li
- Eun-Ang Raiber
- F Miura
- F Ramirez
- Gordon R. McInroy
- H Li
- H Sano
- JH Kim
- Jorg Tost
- K Tanaka
- Katarzyna Modrzynska
- L Ji
- M Frommer
- M Martin
- M Tahiliani
- M Yu
- MJ Booth
- MT McCabe
- N Ponts
- NA Malmquist
- Oliver Billker
- Pieter van Delft
- Q Wang
- R Lister
- RK Tran
- RY Wang
- S Gelfman
- S Kriaucionis
- SA Smallwood
- Shankar Balasubramanian
- WAM Hoeijmakers
- Y Benjamini
- Y Huang
- Publication venue
- 'Public Library of Science (PLoS)'
- Publication date
- Field of study
Actin-related protein Arp4 regulates euchromatic gene expression and development through H2A.Z deposition in blood-stage Plasmodium falciparum
- Author
- A Tarasov
- AM Talman
- B Langmead
- B Li
- BC Millar
- BD Giaimo
- CA Blessing
- DA Fidock
- E Hammam
- EM De La Cruz
- EO Maruyama
- F Ramirez
- H Li
- H Ogiwara
- H Zhang
- HV Goodson
- IA Olave
- J Birnbaum
- J Feng
- J Miao
- J Muller
- JJ Lopez-Rubio
- JL Gordon
- JT Robinson
- L Galarneau
- LA Boyer
- M Gaku
- M Ghorbal
- M Martin
- M Pertea
- M Petter
- M Petter
- M Petter
- MB Trelle
- O Poch
- Q Zhang
- Q Zhang
- R Bartfai
- RM Raisner
- S Allard
- S Baumgarten
- S Xt
- SA Fraschka
- SK Ghosh
- T Yoshida
- TN Siegel
- WAM Hoeijmakers
- WH Wu
- X Shen
- Y Liao
- Publication venue
- 'Springer Science and Business Media LLC'
- Publication date
- Field of study
A single-cell atlas of Plasmodium falciparum transmission through the mosquito
- Author
- A Butler
- A Poran
- AJ Reid
- AM Talman
- ATL Lun
- B Douradinha
- C Hillier
- C Trapnell
- C-M Ho
- CG Toenhake
- CK Moreira
- D Kim
- DJ McCarthy
- DT Riglar
- E Bushell
- EK De Silva
- F Ay
- F Pedregosa
- G Siciliano
- GA Josling
- GA Josling
- HM Shapiro
- J Guizetti
- J Mello-Vieira
- J Shi
- J Thompson
- JA Young
- JM Sa
- K Modrzynska
- K Street
- K Witmer
- KM Matthews
- LA Baton
- LM Yamauchi
- M Kennedy
- M Martin
- M Morita
- M Prudêncio
- M Yuda
- MalariaGEN
- MJ Delves
- MM Nijhout
- NMB Brancucci
- P Sinnis
- PE Duffy
- PR Gilson
- R Amino
- RC Smith
- S Baumgarten
- S Das
- S Gupta
- S Marguerat
- SE Lindner
- T Ponnudurai
- T Stuart
- T Taechalertpaisarn
- TF de Koning-Ward
- TL Bailey
- TL Campbell
- VY Kiselev
- W Graumans
- W Saelens
- WAM Hoeijmakers
- Y Liao
- Publication venue
- 'Springer Science and Business Media LLC'
- Publication date
- Field of study
Community-wide transcriptome of the oral microbiome in subjects with and without periodontitis
- Author
- A Ramette
- AB Berezow
- AD Haffajee
- AJ Van Winkelhoff
- AL Griffen
- Ana E Duran-Pinedo
- APV Colombo
- AR Quinlan
- AR Wattam
- B Liu
- BJ Paster
- C Soneson
- C-H Wang
- CC Ouverney
- CCGM Booijink
- CT Brown
- DA Murray
- DA Relman
- E Mishima
- EL Gross
- ER Rhodes
- F Goulhen
- F Supek
- F Teles
- FE Dewhirst
- G Giannoukos
- HJ Wright
- I Brook
- I Brook
- J Frias-Lopez
- J McCarren
- J Slots
- J Tang-Larsen
- Jacqueline R Starr
- JD Rudney
- JF Siqueira Jr
- Jorge Frias-Lopez
- K Honma
- Keerthana Krishnan
- L Chen
- L Yuan
- LA Ximenez-Fyvie
- M Enersen
- M Hiroi
- M Lecuit
- M Nairz
- M Podar
- MA Herbert
- MD Young
- MH Bender
- MH Larsen
- MJ Jedrzejas
- MM Brinig
- N Segata
- P Belda-Ferre
- P Bullon
- P Cossart
- P Legendre
- PD Marsh
- PE Kolenbrander
- PE Kolenbrander
- PH Rodrigues
- PI Eke
- PM Fives-Taylor
- PM Preshaw
- PS Kumar
- PW Lepp
- Q Xia
- R Kindt
- R Lux
- R.Z. Thomas
- RCV Casarin
- RE Bryant
- RF Frederiksen
- Ricardo Teles
- S Chaudhuri
- S Götz
- S Inagaki
- S Jain
- S Tarazona
- SC Holt
- SJ Ho Sui
- SN Peterson
- SS Socransky
- T Chen
- T Handal
- T Imamura
- T Kitten
- TE Rams
- Tsute Chen
- V Brochu
- V Poroyko
- WAM Hoeijmakers
- WH Boughton
- X Xiong
- Xiaoshan Wang
- Y Marcy
- Y-H Kim
- Publication venue
- 'Springer Science and Business Media LLC'
- Publication date
- Field of study
Evaluation of bias induced by viral enrichment and random amplification protocols in metagenomic surveys of saliva DNA viruses
- Author
- A Bankevich
- A Djikeng
- A López-Bueno
- A López-Bueno
- A Morgulis
- A Reyes
- A Reyes
- A Untergasser
- AG Cobián Güemes
- AJ Pinto
- AJ Székely
- AV Klieve
- B Arezi
- B Arezi
- B Knowles
- B Langmead
- B Xu
- C Kohl
- C Zong
- CA Suttle
- CB Abulencia
- CPD Brussaard
- D Aird
- D Belstrøm
- D Hyatt
- D Kim
- D Willner
- DT Pride
- DT Pride
- DW Lewandowska
- E Arriola
- E Hernando
- EK Binga
- EN Trifonov
- ES Lim
- F von Wintzingerode
- FB Dean
- FB Dean
- FE Angly
- G Grard
- GD Hannigan
- GF Steward
- GM Daly
- GN Condezo
- H Feng
- H Li
- I Kozarewa
- J Depew
- J Wang
- JG Victoria
- JJ Barr
- JK Pickrell
- JL Baker
- JL Castro-Mejía
- JS Towner
- K Holmfeldt
- K Zhang
- K-H Kim
- K-H Kim
- KE Wommack
- KM Ellegaard
- L Blanco
- L Hoyles
- L Li
- L Ning
- L Wu
- L Wu
- M Bredel
- M Breitbart
- M Breitbart
- M Kleiner
- M Ly
- M Rhee
- MB Duhaime
- MR Henn
- N Conceição-Neto
- N Conceição-Neto
- N Popgeorgiev
- N Rascovan
- OE Karlsson
- P Colson
- P Froussard
- R Marine
- R Pinard
- R Robles-Sikisaka
- R Schmieder
- RJ Hall
- RS Lasken
- RS Lasken
- RV Thurber
- S Hayes
- S Hosono
- S Minot
- S Roux
- S Roux
- S Yilmaz
- SA Solonenko
- SL Smits
- SOL Direito
- SR Abeles
- ST Motley
- T Briese
- T Han
- T Rosseel
- TG Mamedov
- V Aggarwala
- WAM Hoeijmakers
- X Wang
- Y Benita
- Y Yuan
- ÁJ Picher
- Publication venue
- 'Springer Science and Business Media LLC'
- Publication date
- Field of study
Detect accessible chromatin using ATAC-sequencing, from principle to applications
- Author
- A Chen
- A Fujimoto
- A Kon
- A Leung
- A Pacis
- A Quillien
- A Varshney
- AB Stergachis
- AC Nelson
- AF Rendeiro
- AK Panigrahi
- AM Ackermann
- B Leeke
- C Kadoch
- C Mazumdar
- CA Melo
- CA Meyer
- CA Musselman
- CB Hug
- CC Hsiung
- CC Yang
- CD Pascoe
- CD Scharer
- CJ Boogerd
- CL Yauk
- DA Cusanovich
- DA Jackson
- DB Haniford
- DR Sen
- DW Parsons
- E Bartova
- E Britton
- E Garcia
- EB Chuong
- ER Mardis
- F Ruf-Zamojski
- F Shao
- F Staib
- GC Yuan
- H Ishii
- H Koohy
- H Raurell-Vila
- I Barozzi
- J Guo
- J Shen
- J Wu
- J Wu
- J Zeron-Medina
- JC Mu
- JD Buenrostro
- JD Buenrostro
- JD Buenrostro
- JL Rinn
- JM Gottesfeld
- JM Rizzo
- JM Simon
- JR Hesselberth
- JS Cumbie
- K Cui
- K Davie
- K Kalmbach
- K Kondo
- K Qu
- KL Miskimen
- L Cong
- L de la Torre-Ubieta
- L Ho
- L Montefiori
- L Song
- L. Song
- LD Attardi
- M Brunelle
- M Lichtinger
- M Murtha
- M Pieri
- M Sausen
- M Vermeulen
- M Ye
- M Zalzman
- Mark W E J Fiers
- MR Corces
- MR Corces
- MW Snyder
- N Kumasaka
- Nan Miao
- O Bell
- P Milani
- P Tropberger
- P Wunsche
- PG Hendrickson
- Q Wang
- R Lakshminarasimhan
- RA Dirks
- RC Wu
- RE Thurman
- S Bhattacharyya
- S Bianco
- S Funaya
- S Maezawa
- S Matoba
- S Picelli
- S Pott
- SA Morris
- SG Landt
- SJ Tekel
- ST Younger
- SW Criscione
- T Chen
- T Kouzarides
- T Nammo
- T Pederson
- T Riley
- Tao Sun
- TJF Pranzatelli
- TS Macfarlan
- W Gu
- WAM Hoeijmakers
- WS Reznikoff
- X Bao
- X Chen
- X Wang
- X Wei
- Y Su
- YG Chung
- YL Li
- Yuanyuan Sun
- Z Lu
- Publication venue
- 'Springer Science and Business Media LLC'
- Publication date
- Field of study