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6 research outputs found

Assembly of long error-prone reads using de Bruijn graphs

Author: Antipov
Boisvert
Bonissone
Booher
Goodwin
Jeffrey Yuan
Koren
Lin
Lin
Mark Chaisson
Max W. Shen
Mikhail Kolmogorov
Myers
Pavel A. Pevzner
Pevzner
Prjibelski
Risse
Ronen
Salzberg
Vasilinetc
Yu Lin
Publication venue: 'Proceedings of the National Academy of Sciences'
Publication date
Field of study

rnaSPAdes: a de novo transcriptome assembler and its application to RNA-Seq data

Author: Abdel-Ghany
Andrews
Antipov
Aubry
Bankevich
Bankevich
Bolger
Bray
Bushmanova
Bushmanova
Byrne
Chang
Dobin
Garalde
Gordon
Grabherr
Kim
Lasken
Leung
Leung
Li
Li
Liu
Love
Martin
Minoche
Nikolenko
Nip
Nurk
Peng
Pertea
Pevzner
Prjibelski
Robertson
Schulz
Simão
Smith-Unna
Tilgner
Trapnell
Vasilinetc
Xie
Zerbino
Publication venue: 'Oxford University Press (OUP)'
Publication date
Field of study

Versatile genome assembly evaluation with QUAST-LG

Author: Abouelhoda
Alexey Gurevich
Alla Mikheenko
Andrey Prjibelski
Antipov
Bankevich
Boetzer
Bradnam
Bresler
Chaisson
Chaisson
Chapman
Chapman
Chin
Clark
Dmitry Antipov
Earl
Ghodsi
Girgis
Gnerre
Gurevich
Hunt
Jackman
Kajitani
Kokot
Kolmogorov
Koren
Krzywinski
Kurtz
Lam
Layer
Li
Li
Li
Lin
Lomsadze
Luo
MacDonald
Magoc
Mapleson
Marcais
Martin
Mikheenko
Mikheenko
Miller
Myers
O’connell
Putnam
Roberts
Sahlin
Salzberg
Sczyrba
Simao
Smit
Vaser
Vasilinetc
Vladislav Saveliev
Wala
Walker
Zimin
Zook
Publication venue: 'Oxford University Press (OUP)'
Publication date
Field of study

Tracking resistomes, virulence genes, and bacterial pathogens in long-term manure-amended greenhouse soils

Author: Anderson
Bastian
Benjamini
Binh
Buchfink
Carmeli
Chen
Chen
Coll
Dharmasena
Dou
Duriez
Enault
Fang
Fang
Forsberg
Forsberg
Gillings
Guerra
Hammesfahr
Han
Heuer
Houpu Zhang
Hu
Hua Fang
Huson
Hyatt
Jacobsen
Jia
Jia
Jiajin Song
Kang
Karkman
Langmead
Lee
Li
Lu
McMillan
Mengcen Wang
Pal
Passarelli-Araujo
Patel
Perez-Valera
Pornsukarom
Pu
Qian
Qianke Zhang
Roberto
Shiyu Chen
Sun
Vasilinetc
Wood
Wu
Xie
Xiong
Yang
Ye
Yunlong Yu
Zeng
Zhang
Zhang
Zhengnan Long
Zhou
Zihan Zhang
Publication venue: 'Elsevier BV'
Publication date
Field of study

Comparative analysis of de novo assemblers for variation discovery in personal genomes

Author: Abecasis
Bishara
Bodily
Brandt
Chaisson
Chaisson
Chen
Compeau
Delaneau
DePristo
Desai
Eric W Klee
Falchi
Fujimoto
Garrison
Glusman
Gough
Huihuang Yan
Iqbal
Kelley
Li
Li
Li
Li
Li
Li
Li
Lonardi
Lunter
Lupski
McKenna
McLure
Meienberg
Meynert
Michael Kalmbach
Miller
Mirebrahim
Mose
Myers
Myers
Nakamura
Narzisi
Narzisi
Olson
Paszkiewicz
Petersdorf
Pevzner
Rimmer
Robinson
Selvaraj
Shen
Shulan Tian
Simpson
Simpson
Sudmant
Susan L Slager
Tian
Tian
Van der Auwera
Vasilinetc
Weisenfeld
Wu
Yang
Yang
Zook
Publication venue: 'Oxford University Press (OUP)'
Publication date
Field of study

Taxogenomic assessment and genomic characterisation of Weissella cibaria strain 92 able to metabolise oligosaccharides derived from dietary fibres

Author: A Boc
A Gurevich
A Patel
A Patel
AC Ouwehand
ACE Darling
AD Prjibelski
AI Rissman
AM Bolger
AT Adesulu-Dahunsi
B Snel
C Hill
Database resources of the National Center for Biotechnology Information
DB Jordan
DS Vasanthakumari
E Thursby
F Cui
H Michlmayr
H Ohara
I Vasilinetc
JA Linares-Pastén
JS Moon
K Lagesen
K Makarova
KH Schleifer
KJ Björkroth
KM Lynch
KMJ Van Laere
M Abou Hachem
M Mcintosh
M Vital
MD Collins
ME Fraunhofer
MJ Ankenbrand
ML Marco
N Saitou
P Falck
P Falck
P Immerzeel
P Louis
PP Chan
R Crittenden
R Overbeek
R Plapp
RRR Sardari
RZ Ahmed
S Fijan
S Mathew
SF Altschul
T Immerstrand
TJ Treangen
TN Petersen
WF Broekaert
Y Ohashi
Y Shi
Publication venue: 'Springer Science and Business Media LLC'
Publication date
Field of study

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