HfMV1 groups and virulence

HfMV1 groups and virulenc

Table S3

overall pairwise identities (nuclear sequences

Supplementary tables S4a,b,c

overall pairwise identities (amino acid sequences

Pearson’s correlation coefficients (r) between allelic richness (<i>A</i>r), gene diversity (<i>H</i>_E), inbreeding coefficient calculated with INEST (<i>F</i>_ISINEST), latitude and longitude calculated for populations within: (i) Europe overall, (ii) TESS group 2 (constituting populations from northern and eastern Europe, see S1 Table), and (iii) Norway.

<p>Pearson’s correlation coefficients (r) between allelic richness (<i>A</i>r), gene diversity (<i>H</i>_E), inbreeding coefficient calculated with INEST (<i>F</i>_ISINEST), latitude and longitude calculated for populations within: (i) Europe overall, (ii) TESS group 2 (constituting populations from northern and eastern Europe, see <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0167104#pone.0167104.s001" target="_blank">S1 Table</a>), and (iii) Norway.</p

Distribution of chloroplast haplotypes in 42 common ash (<i>Fraxinus excelsior</i>) population samples.

<p>Coding of the haplotypes follows Heuertz <i>et al</i>. [<a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0167104#pone.0167104.ref041" target="_blank">41</a>] and Sutherland <i>et al</i>. [<a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0167104#pone.0167104.ref033" target="_blank">33</a>], except for the novel haplotypes H17, H18 and H19. The definitions of the haplotypes are given in <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0167104#pone.0167104.t001" target="_blank">Table 1</a>. The shaded gray areas represent the natural distribution range of common ash [<a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0167104#pone.0167104.ref029" target="_blank">29</a>].</p

Principal Coordinates Analysis (PCoA) plot of the first and the second principal coordinates based on the genetic composition at six nuclear microsatellites of 42 population samples of common ash (<i>Fraxinus excelsior</i>).

<p>For population names see <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0167104#pone.0167104.s001" target="_blank">S1 Table</a> and <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0167104#pone.0167104.s006" target="_blank">S1 Fig</a>. Each population is given the color of the STRUCTURE group (<a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0167104#pone.0167104.g002" target="_blank">Fig 2C</a>) in which it had the highest proportion of membership (<a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0167104#pone.0167104.s001" target="_blank">S1 Table</a>).</p

Basic characteristics of the six nuclear microsatellite loci in <i>Fraxinus excelsior</i> used in this study.

<p><i>A</i>r, allelic richness, calculated based on 13 diploid individuals; <i>H</i>_O, observed heterozygosity; <i>H</i>_E, expected heterozygosity; <i>F</i>_IS, inbreeding coefficient (the coefficients denoted with asterisk (*) are significantly greater than zero); <i>F</i>_ST, coefficient of genetic differentiation among populations [<a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0167104#pone.0167104.ref063" target="_blank">63</a>]; and <i>F</i>_STENA, coefficient of genetic differentiation calculated using ENA correction [<a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0167104#pone.0167104.ref056" target="_blank">56</a>].</p

Genetic Structure in the Northern Range Margins of Common Ash, <i>Fraxinus excelsior</i> L. - Fig 4

<p><b>Linear regression between allelic richness and latitude for common ash (<i>Fraxinus excelsior</i>) populations a) across Europe overall, b) across northern and eastern European populations putatively constituting colonization from south-eastern Europe northwards (TESS group 2) and c) across Norwegian populations.</b> Allelic richness is calculated based on a random set of 13 diploid individuals per population.</p