Microbial platform to synthesize chorismate derivatives via metabolic engineering approach

A synthetic metabolic pathway suitable for the production of chorismate derivatives was designed in Escherichia coli. An L-phenylalanine-overproducing E. coli strain was engineered to enhance the availability of phosphoenolpyruvate (PEP), which is a key precursor in the biosynthesis of aromatic compounds in microbes. Two major reactions converting PEP to pyruvate were inactivated. Using this modified E.coli as a base strain, we tested our system by carrying out the production of salicylate, a high-demand aromatic chemical. The titer of salicylate reached 11.5 g/L in batch culture after 48 h cultivation in a 1-liter jar fermentor, and the yield from glucose as the sole carbon source exceeded 40% (mol/mol). In this test case, we found that pyruvate was synthesized primarily via salicylate formation and the reaction converting oxaloacetate to pyruvate. In order to demonstrate the generality of our designed strain, we employed this platform for the production of each of 7 different chorismate derivatives. Each of these industrially important chemicals was successfully produced to levels of 1-3 g/L in test tube-scale culture. In addition, by extending chorismate pathway, we successfully achieved maleate production, which is one of significant dicarboxylic acid as well as succinate and malate. A novel synthetic pathway of maleate was constructed in our base strain, and the productivity reached 7.1 g/L. This is the first report about maleate production using genetically engineered micro-organisms

Effects of Chain End Structures on Pyrolysis of Poly(L-lactic acid) Containing Tin Atoms

Thermal degradation of high molecular weight PLLA containing residual tin atoms was investigated as a means of controlling the reaction for feedstock recycling to L,L-lactide. To clarify the pyrolysis mechanism of the PLLA, three samples with different chain end structures were prepared, namely, as-polymerized PLLA-ap, precipitated-with-methanol PLLA-pr, and purified PLLA-H. From pyrolyzate and kinetic analyses, typical degradation mechanisms of Sn-containing PLLA were clarified. In other words, it was assumed that the pyrolysis of PLLA-ap proceeds through a zero-order weight loss process with the apparent Ea = 80-90 kJ mol-1, and with the occurrence of backbiting and transesterification reactions caused by Sn-alkoxide chain ends. The pyrolysis of PLLA-pr was also assumed to proceed via a zero-order weight loss process with apparent Ea = 120-130 kJ mol-1, with the proposed mechanism being Sn-catalyzed selective lactide elimination caused by Sn-carboxylate chain ends. Both pyrolysis of PLLA-ap and PLLA-pr produced L,L-lactide selectively. These degradation mechanisms and products are in contrast to those of PLLA-H, in which a large amount of diastereoisomers and cyclic oligomers were formed by random degradation. From this study, the complicated PLLA pyrolysis behavior as reported previously could be explained properly

Thermal degradation of poly(L-lactide): effect of alkali earth metal oxides for selective L,L-lactide formation

To achieve the feed stock recycling of poly(L-lactide) (PLLA) to L,L-lactide, PLLA composites including alkali earth metal oxides, such as calcium oxide (CaO) and magnesium oxide (MgO), were prepared and the effect of such metal oxides on the thermal degradation was investigated from the viewpoint of selective L,L-lactide formation. Metal oxides both lowered the degradation temperature range of PLLA and completely suppressed the production of oligomers other than lactides. CaO markedly lowered the degradation temperature, but caused some racemization of lactide, especially in a temperature range lower than 250 °C. Interestingly, with MgO racemization was avoided even in the lower temperature range. It is considered that the effect of MgO on the racemization is due to the lower basicity of Mg compared to Ca. At temperatures lower than 270 °C, the pyrolysis of PLLA/MgO (5 wt%) composite occurred smoothly causing unzipping depolymerization, resulting in selective L,L-lactide production. A degradation mechanism was discussed based on the results of kinetic analysis. A practical approach for the selective production of L,L-lactide from PLLA is proposed by using the PLLA/MgO composite

Effect of Sn Atom on Poly(Ｌ-lactic acid) Pyrolysis

Tin 2-ethylhexanoate is an indispensable component of commercially available poly(L-lactic acid) (PLLA). However, the thermal degradation kinetics of PLLA containing Sn have not yet clearly been established; in particular, whether the degradation mechanism is a 1st-order or a random reaction. To clarify the effects of residual Sn on PLLA pyrolysis, PLLA samples with different Sn contents from 20 to 607 ppm were prepared and subjected to pyrolysis analysed with pyrolysis-gas chromatography/mass spectroscopy (Py-GC/MS) and thermogravimetry (TG). The pyrolysis of PLLA Sn-607 (Sn content: 607 ppm) with Py-GC/MS in the temperature range of 40–400 °C selectively produced lactides. In contrast, the pyrolysis of PLLA Sn-20 (Sn content: 20 ppm) was accompanied by the production of cyclic oligomers. The dynamic pyrolysis of PLLA-Sn samples by TG clearly indicated that with an increase in Sn content there was a shift to a lower degradation temperature range and a decrease in activation energy Ea. The kinetic analysis of the dynamic pyrolysis data indicates that the Sn-catalyzed pyrolysis starts through a random degradation behaviour and then shifts to a zero-order weight loss as the main process. Three reactions were put forward as being possible mechanisms of the zero-order weight loss; one being an unzipping reaction accompanying a random transesterification, the other two being the Sn-catalyzed pseudo-selective and selective lactide elimination reactions from random positions on a polymer chain. The kinetic parameter values obtained could be adequately explained for each degradation process

Study on roles of anaplerotic pathways in glutamate overproduction of Corynebacterium glutamicum by metabolic flux analysis

<p>Abstract</p> <p>Background</p> <p><it>Corynebacterium glutamicum </it>has several anaplerotic pathways (anaplerosis), which are essential for the productions of amino acids, such as lysine and glutamate. It is still not clear how flux changes in anaplerotic pathways happen when glutamate production is induced by triggers, such as biotin depletion and the addition of the detergent material, Tween 40. In this study, we quantitatively analyzed which anaplerotic pathway flux most markedly changes the glutamate overproduction induced by Tween 40 addition.</p> <p>Results</p> <p>We performed a metabolic flux analysis (MFA) with [1-¹³C]- and [U-¹³C]-labeled glucose in the glutamate production phase of <it>C. glutamicum</it>, based on the analysis of the time courses of ¹³C incorporation into proteinogenic amino acids by gas chromatography-mass spectrometry (GC-MS). The flux from phosphoenolpyruvate (PEP) to oxaloacetate (Oxa) catalyzed by phosphoenolpyruvate carboxylase (PEPc) was active in the growth phase not producing glutamate, whereas that from pyruvate to Oxa catalyzed by pyruvate carboxylase (Pc) was inactive. In the glutamate overproduction phase induced by the addition of the detergent material Tween 40, the reaction catalyzed by Pc also became active in addition to the reaction catalyzed by PEPc.</p> <p>Conclusion</p> <p>It was clarified by a quantitative ¹³C MFA that the reaction catalyzed by Pc is most markedly increased, whereas other fluxes of PEPc and PEPck remain constant in the glutamate overproduction induced by Tween 40. This result is consistent with the previous results obtained in a comparative study on the glutamate productions of genetically recombinant Pc- and PEPc-overexpressing strains. The importance of a specific reaction in an anaplerotic pathway was elucidated at a metabolic level by MFA.</p

Construction of novel metabolic pathways with artificial enzymes

Non-fossil raw materials can be utilized for the production of useful compounds by way of microbial fermentation . Sugars are obtained from carbon fixations of plants or photosynthetic microorganisms, and are used as a carbon source for the biosynthesis of useful target compounds by genetically modified microorganisms. In order for a microorganism to produce enough target compound, techniques for optimal metabolic design must include balance of energy production/consumption, redox pathways, and intracellular carbon flow. With recent innovations in genome analysis technology and information processing technology, computational design tools that can describe more than 1000 genome-scale metabolic reactions to efficiently produce target compounds have been developed worldwide. However, the established tools are not designed to search and create biosynthetic pathways for production of non-natural compounds from fossil resources. We developed BioProV and M-path, new simulation tools that enable metabolic design for the biosynthesis of unnatural compounds. By combining these tools with enzyme engineering technology, we succeeded in expanding the scope of bioproduction targets. The first example is construction of an artificial metabolic pathway to biosynthesize isoprene. Isoprene the raw material for production of synthetic rubber that can be used in automobile tires. Currently, isoprene is industrially produced as a by-product of naphtha pyrolysis. Therefore, by establishing green isoprene production technology, dependence upon petroleum can be reduced. Isoprene is a substance that can exist within cells of many organisms as a monomer of polyisoprene rubber, and also as a structural unit of secondary metabolites. It is difficult to optimize its synthentic pathway due to shortages of intracellular ATP supply, and challenges in the introduction of improved biosynthetic pathways. In nature, isoprene is produced from mevalonic acid through a five-step reaction, but the newly constructed artificial metabolic pathway consists of just two steps from mevalonic acid to isoprene. This results in a three-fold reduction in cellular energy consumption. Furthermore, we succeeded in constructing a highly active enzyme that exhibits 10,000-fold higher isoprene-producing activity relative to natural enzymes. By introducing these artificial metabolic reactions into Escherichia coli, efficient artificial isoprene production was achieved. In addition, we have developed a microbial production system for 1,3-butadiene, another alternative source for synthetic rubber. Moreover, rationally engineered enzymes from insects and plants enzymes have resulted in the construction of an artificial pathway to benzylisoquinoline alkaloids and downstream opioid analgesics

Engineered Nanogel Particles Enhance the Photoautotrophic Biosynthesis of Polyhydroxyalkanoate in Marine Photosynthetic Bacteria

Improving polyhydroxyalkanoate (PHA, a biodegradable plastic) production under photoautotrophic cultivation is challenging for sustainable bioproduction. In this study, we demonstrated the use of engineered nanogel particles to enhance PHA accumulation in the marine photosynthetic bacterium Rhodovulum sulfidophilum under photoautotrophic culture. We screened the effect of 13 engineered nanogel particles on the cell growth and PHA accumulation of R. sulfidophilum. The addition of anionic nanogel particles significantly enhanced PHA accumulation in R. sulfidophilum up to 157-fold compared to that without nanogel particles. By performing ¹³C tracer experiments and gas chromatography–mass spectrometry analysis, we confirmed that HCO₃⁻ was assimilated throughout the central carbon metabolism and that the accumulated PHA was indeed incorporated from HCO₃⁻. Our results indicate successful PHA production with the supplementation of engineered nanogel particles under photoautotrophic cultivation in R. sulfidophilum. Furthermore, the strategy of using engineered nanoparticles demonstrated in this study may be applicable to other microbial cell factories to produce other commodity metabolites

Feedstock Recycling of Flame-Resisting Poly(lactic acid)/Aluminum Hydroxide Composite to L,L-lactide

To achieve the chemical recycling of flame-resisting materials consisting of poly(L-lactic acid) (PLLA), a safer flame-resisting material, PLLA/aluminum hydroxide {Al(OH)3} composite, was investigated the capability of the feedstock recyclability to optically active monomer L,L-lactide. The thermal stabilization of the composite was improved compared to those of as-polymerized PLLA and Al(OH)3 themselves, which makes the melt processing of the composite easier. Nevertheless, at temperatures lower than 300°C the effective depolymerization of PLLA proceeded, without any racemization reaction, to selectively convert into L,L-lactide, with Al(OH)3 acting as a catalyst for the depolymerization. This means that the PLLA/Al(OH)3 composite is capable of reconciling flame resistance with feedstock recycling of PLLA to cyclic monomer

Efficient 3‐Hydroxybutyrate Production by Quiescent Escherichia coli Microbial Cell Factories is Facilitated by Indole‐Induced Proteomic and Metabolomic Changes

The authors show that quiescent (Q‐Cell) Escherichia coli cultures can maintain metabolic activity in the absence of growth for up to 24 h, leading to four times greater specific productivity of a model metabolite, 3‐hydroxybutyrate (3HB), than a control. Q‐cells can be created by using the proton ionophore indole to halt cell division of an hns mutant strain. This uncouples metabolism from cell growth and allows for more efficient use of carbon feedstocks because less metabolic effort is diverted to surplus biomass production. However, the reason for the increased productivity of cells in the quiescent state was previously unknown. In this study, proteome expression patterns between wild‐type and Q‐cell cultures show that Q‐cells overexpress stress response proteins, which prime them to tolerate the metabolic imbalances incurred through indole addition. Metabolomic data reveal the accumulation of acetyl‐coenzyme A and phosphoenolpyruvate: excellent starting points for high‐value chemical production. We demonstrate the exploitation of these accumulated metabolites by engineering a simple pathway for 3HB production from acetyl‐coenzyme A. Quiescent cultures produced half the cell biomass of control cultures lacking indole, but were still able to produce 39.4 g L−1 of 3HB compared to 18.6 g L−1 in the control. Q‐cells therefore have great potential as a platform technology for the efficient production of a wide range of commodity and high value chemicals