26 research outputs found

    Plasmid pP62BP1 isolated from an Arctic Psychrobacter sp. strain carries two highly homologous type II restriction-modification systems and a putative organic sulfate metabolism operon

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    The complete nucleotide sequence of plasmid pP62BP1 (34,467 bp), isolated from Arctic Psychrobacter sp. DAB_AL62B, was determined and annotated. The conserved plasmid backbone is composed of several genetic modules, including a replication system (REP) with similarities to the REP region of the iteron-containing plasmid pPS10 of Pseudomonas syringae. The additional genetic load of pP62BP1 includes two highly related type II restriction-modification systems and a set of genes (slfRCHSL) encoding enzymes engaged in the metabolism of organic sulfates, plus a putative transcriptional regulator (SlfR) of the AraC family. The pP62BP1 slflocus has a compact and unique structure. It is predicted that the enzymes SlfC, SlfH, SlfS and SlfL carry out a chain of reactions leading to the transformation of alkyl sulfates into acyl-CoA, with dodecyl sulfate (SDS) as a possible starting substrate. Comparative analysis of the nucleotide sequences of pP62BP1 and other Psychrobacter spp. plasmids revealed their structural diversity. However, the presence of a few highly conserved DNA segments in pP62BP1, plasmid 1 of P. cryohalolentis K5 and pRWF-101 of Psychrobacter sp. PRwf-1 is indicative of recombinational shuffling of genetic information, and is evidence of lateral gene transfer in the Arctic environment

    Correlative Laboratory Nano‐CT and 360° Electron Tomography of Macropore Structures in Hierarchical Zeolites

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    Hierarchical pore structures exhibit morphological features on several length scales, which govern important materials properties in catalysis, such as catalytic activity, diffusivity or selectivity. Correlative tomography offers unique opportunities for a comprehensive and scale‐bridging 3D characterization of such complex pore morphologies, which is crucial to further optimize materials design and synthesis routines. This study explores the capabilities of correlative 360° electron tomography (ET) and lab‐based nano X‐ray computed tomography (Nano‐CT) enabling 3D analyses of volumes of up to (60 µm)³ with down to nm resolution, as demonstrated for zeolite particles with embedded macropores. By first applying the two techniques to the same particle the higher resolution and fidelity of ET are used to improve the segmentation of pore space in the Nano‐CT reconstruction. Extended statistical relevance and access to interparticle pore space are obtained from reconstructions of larger particle agglomerates, using the large‐field‐of‐view mode of the Nano‐CT. The presented correlative approach enables real space analyses of important pore characteristics for comparison with complementary pore characterization techniques. Moreover, by investigating samples from different stages of the synthesis, 360°‐ET and Nano‐CT provide unique insights into the formation mechanism of porous materials, as demonstrated for the steam‐assisted crystallization of the macroporous zeolite particles
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