36 research outputs found
Ultrasonic Image's Annotation Removal: A Self-supervised Noise2Noise Approach
Accurately annotated ultrasonic images are vital components of a high-quality
medical report. Hospitals often have strict guidelines on the types of
annotations that should appear on imaging results. However, manually inspecting
these images can be a cumbersome task. While a neural network could potentially
automate the process, training such a model typically requires a dataset of
paired input and target images, which in turn involves significant human
labour. This study introduces an automated approach for detecting annotations
in images. This is achieved by treating the annotations as noise, creating a
self-supervised pretext task and using a model trained under the Noise2Noise
scheme to restore the image to a clean state. We tested a variety of model
structures on the denoising task against different types of annotation,
including body marker annotation, radial line annotation, etc. Our results
demonstrate that most models trained under the Noise2Noise scheme outperformed
their counterparts trained with noisy-clean data pairs. The costumed U-Net
yielded the most optimal outcome on the body marker annotation dataset, with
high scores on segmentation precision and reconstruction similarity. We
released our code at https://github.com/GrandArth/UltrasonicImage-N2N-Approach.Comment: 10 pages, 7 figure
Multiple Frequency Bands Analysis of Large Scale Intrinsic Brain Networks and Its Application in Schizotypal Personality Disorder
The human brain is a complex system composed by several large scale intrinsic networks with distinct functions. The low frequency oscillation (LFO) signal of blood oxygen level dependent (BOLD), measured through resting-state fMRI, reflects the spontaneous neural activity of these networks. We propose to characterize these networks by applying the multiple frequency bands analysis (MFBA) to the LFO time courses (TCs) resulted from the group independent component analysis (ICA). Specifically, seven networks, including the default model network (DMN), dorsal attention network (DAN), control executive network (CEN), salience network, sensorimotor network, visual network and limbic network, are identified. After the power spectral density (PSD) analysis, the amplitude of low frequency fluctuation (ALFF) and the fractional amplitude of low frequency fluctuation (fALFF) is determined in three bands: <0.1 Hz; slow-5; and slow-4. Moreover, the MFBA method is applied to reveal the frequency-dependent alternations of fALFF for seven networks in schizotypal personality disorder (SPD). It is found that seven networks can be divided into three categories: the advanced cognitive networks, primary sensorimotor networks and limbic networks, and their fALFF successively decreases in both slow-4 and slow-5 bands. Comparing to normal control group, the fALFF of DMN, DAN and CEN in SPD tends to be higher in slow-5 band, but lower in slow-4. Higher fALFF of sensorimotor and visual networks in slow-5, higher fALFF of limbic network in both bands have been observed for SPD group. The results of ALFF are consistent with those of fALFF. The proposed MFBA method may help distinguish networks or oscillators in the human brain, reveal subtle alternations of networks through locating their dominant frequency band, and present potential to interpret the neuropathology disruptions
Self-supervised Noise2noise Method Utilizing Corrupted Images with a Modular Network for LDCT Denoising
Deep learning is a very promising technique for low-dose computed tomography
(LDCT) image denoising. However, traditional deep learning methods require
paired noisy and clean datasets, which are often difficult to obtain. This
paper proposes a new method for performing LDCT image denoising with only LDCT
data, which means that normal-dose CT (NDCT) is not needed. We adopt a
combination including the self-supervised noise2noise model and the
noisy-as-clean strategy. First, we add a second yet similar type of noise to
LDCT images multiple times. Note that we use LDCT images based on the
noisy-as-clean strategy for corruption instead of NDCT images. Then, the
noise2noise model is executed with only the secondary corrupted images for
training. We select a modular U-Net structure from several candidates with
shared parameters to perform the task, which increases the receptive field
without increasing the parameter size. The experimental results obtained on the
Mayo LDCT dataset show the effectiveness of the proposed method compared with
that of state-of-the-art deep learning methods. The developed code is available
at https://github.com/XYuan01/Self-supervised-Noise2Noise-for-LDCT
A General Solution to Least Squares Problems with Box Constraints and Its Applications
The main contribution of this paper is presenting a flexible solution to the box-constrained least squares problems. This solution is applicable to many existing problems, such as nonnegative matrix factorization, support vector machine, signal deconvolution, and computed tomography reconstruction. The key concept of the proposed algorithm is to replace the minimization of the cost function at each iteration by the minimization of a surrogate, leading to a guaranteed decrease in the cost function. In addition to the monotonicity, the proposed algorithm also owns a few good features including the self-constraint in the feasible region and the absence of a predetermined step size. This paper theoretically proves the global convergence for a special case of below-bounded constraints. Using the proposed mechanism, some valuable algorithms can be derived. The simulation results demonstrate that the proposed algorithm provides performance that is comparable to that of other commonly used methods in numerical experiment and computed tomography reconstruction