Systematics and plastid genome evolution of the cryptically photosynthetic parasitic plant genus Cuscuta (Convolvulaceae)

<p>Abstract</p> <p>Background</p> <p>The genus <it>Cuscuta </it>L. (Convolvulaceae), commonly known as dodders, are epiphytic vines that invade the stems of their host with haustorial feeding structures at the points of contact. Although they lack expanded leaves, some species are noticeably chlorophyllous, especially as seedlings and in maturing fruits. Some species are reported as crop pests of worldwide distribution, whereas others are extremely rare and have local distributions and apparent niche specificity. A strong phylogenetic framework for this large genus is essential to understand the interesting ecological, morphological and molecular phenomena that occur within these parasites in an evolutionary context.</p> <p>Results</p> <p>Here we present a well-supported phylogeny of <it>Cuscuta </it>using sequences of the nuclear ribosomal internal transcribed spacer and plastid <it>rps2</it>, <it>rbcL </it>and <it>matK </it>from representatives across most of the taxonomic diversity of the genus. We use the phylogeny to interpret morphological and plastid genome evolution within the genus. At least three currently recognized taxonomic sections are not monophyletic and subgenus <it>Cuscuta </it>is unequivocally paraphyletic. Plastid genes are extremely variable with regards to evolutionary constraint, with <it>rbcL </it>exhibiting even higher levels of purifying selection in <it>Cuscuta </it>than photosynthetic relatives. Nuclear genome size is highly variable within <it>Cuscuta</it>, particularly within subgenus <it>Grammica</it>, and in some cases may indicate the existence of cryptic species in this large clade of morphologically similar species.</p> <p>Conclusion</p> <p>Some morphological characters traditionally used to define major taxonomic splits within <it>Cuscuta </it>are homoplastic and are of limited use in defining true evolutionary groups. Chloroplast genome evolution seems to have evolved in a punctuated fashion, with episodes of loss involving suites of genes or tRNAs followed by stabilization of gene content in major clades. Nearly all species of <it>Cuscuta </it>retain some photosynthetic ability, most likely for nutrient apportionment to their seeds, while complete loss of photosynthesis and possible loss of the entire chloroplast genome is limited to a single small clade of outcrossing species found primarily in western South America.</p

Maintaining the strategic edge: the defence of Australia in 2015

The recent and continuing changes in Southeast Asia - the economic calamity in 1997-98, the overthrow of President Soeharto's New Order and the tenuous establishment of democracy, and the horrific circumstances of East Timor's independence - have disturbed Australia's security situation more seriously than anything since the 1960s, when Australia was at war (albeit covertly) with Indonesia in Borneo and had a task force in Vietnam. The rate of technological change is also unprecedented, especially in the area of information technology (IT) and its manifold applications, promising a revolution in military affairs (RMA), some aspects of which are very attractive for Australian defence planning. At the same time, the Australian Defence Force (ADF) faces the imminent prospect of 'block obsolescence' - when major platforms such as the F/A-18 Hornet multi-role fighter aircraft, the F-111 strike fighters, the P-3C Orion long-range maritime patrol aircraft, and all of the navy's surface combatants, will need to be replaced (or their tasks foregone). Addressing these issues will require the development of a sound appreciation of Australia's security environment, and of clear and coherent strategic guidance for defence force planning. The purpose of this volume is to assist and inform these processes

Training and the attentional blink: Raising the ceiling does not remove the limits

The attentional blink (AB) is a widely studied deficit in reporting the second of two sequentially presented targets when they occur within 500 milliseconds. The AB often is interpreted to index a structural limit in sequential visual processing. However, this interpretation is challenged by reports that the deficit can be reduced with several hundred trials of specific training (Braun in Nature, 393(6684), 424–425, 1998; Choi et al. in Proceedings of the National Academy of Sciences, 109(30), 12242–12247, 2012; Taatgen et al. in Cognitive Psychology, 59(1), 1–29, 2009) and other reports that some individuals experience very little or no deficit, even without specific training (Martens et al. in Journal of Cognitive Neuroscience, 18(9), 1423-1438, 2006). Yet neither of these claims has been studied when the artifact of ceiling effects has been removed. We sent a small number of participants (n = 5) home to practice an AB task on their mobile phones for 3,000-6,000 trials (Experiment 1) and trained a much larger number of participants (n = 48) in a similar way for 1,200-1,800 trials (Experiment 2). Both experiments used adaptive procedures to equate task difficulty throughout training to keep second-target accuracy below ceiling levels. The results showed strong training effects on the rate of processing sequential information. Despite this, there were (a) robust AB effects after training for most participants, (b) no benefit for training on difficult versus easy target tasks, and (c) substantial correlations between the magnitude of the AB before and after extensive training. These findings support the interpretation that the AB is an index of a structural limit in the ability to consciously process rapid visual sequences.No Full Tex

T1 difficulty affects the AB: Manipulating T1 word frequency and T1 orthographic neighbor frequency

Colored target words were presented with distractor nonwords in a rapid serial visual presentation (RSVP) task. In Experiment 1, the attentional blink (AB) effect on T2 accuracy was larger when T1 was a difficult (low-frequency) word than when it was a high-frequency word. In Experiment 2 the effect of T1 frequency on the AB was replicated in a between-participants design, and the frequency of T1's one-letter different neighbors (e.g., case, bare, for care) interacted with T1 frequency in its effects on T2 accuracy. Experiment 3 confirmed the effect of T1 frequency over 6\ua0T1-T2 lags. The effects of T1 characteristics were sensitively assessed in the AB and were more consistent with resource depletion theories than control-process accounts