Dynamics of fish diversity across an environmental gradient in the Seribu Islands reefs off Jakarta

Madduppa HH, Subhan B, Suparyani E, Siregar AM, Arafat D, Tarigan SA, Alimuddin, Khairudi D, Rahmawati F, Bramandito A. 2013. Dynamics of fish diversity across an environmental gradient in the Seribu Islands reefs off Jakarta. Biodiversitas 14: 17-24. The reefs of Seribu Islands have been affected by multitude of anthropogenic pressures. However, the biodiversity of reef fishes across the archipelago linked to environmental condition is poorly known. This study aimed to investigate the biodiversity and the trophic level of fish communities across the archipelago. The study on reef fish communities was conducted on 33 reef sites associated with islands or shoal randomly chosen from each zone along environmental gradients from the inshore water nearest of Jakarta Bay to the offshore water of the outer islands. The study sites represented each sub-districts within the archipelago, namely Pari, Tidung, Panggang, Kelapa, and Harapan. A total of 46,263 individual fishes were counted, belonging to 216 species and 29 families. The multivariate analysis of fish abundance using the Bray Curtis similarity index and non-metric multidimensional scaling (MDS) clearly showed the clustering of sub-districts, near and far from Jakarta Bay. The results showed that the sub-districts can be clustered into three groups. Group one consists of one sub-district (Pari) located in the southern part of the Seribu Islands near Jakarta Bay. Group two consists of three sub-districts (Tidung, Panggang, Kelapa) located in mid of the archipelago. The third group consists of one sub-district (Harapan) located in the northern part of the Seribu Islands. Based on species richness and fish diversity indices, the sub-districts can be clustered into two groups (1 = Pari and Tidung, 2 = Panggang Kelapa, Harapan). However, levels of similarities among sub-districts varied. The fish community in sub-district of Pari was dominated by carnivorous, omnivorous and herbivorous fishes, while those in the rest of sub-districts were dominated by omnivorous and carnivorous fishes. The present study results showed that the biodiversity of reef fishes across the Seribu Islands seemed to be linked to the environmental conditions

ECOLOGICAL IMPACT OF BLEACHING EVENT 2010 IN NORTHERN ACEH

Bulan April-Mei 2010 Perairan Andaman termasuk perairan Aceh mengalami kenaikan suhu permukaan air laut yang drastis. Kenaikan suhu permukaan air laut tersebut telah menyebabkan pemutihan karang di beberapa tempat di dunia, termasuk perairan utara Aceh. Survei pemutihan karang telah dilakukan untuk mengukur dampak pemutihan karang terhadap ekosistem terumbu karang yang meliputi, index pemutihan karang, tutupan karang keras dan kelimpahan ikan karang. Hasil survey menunjukkan bahwa lebih dari 35% karang keras yang memutih mengalami kematian. Genera karang yang mengalami tingkat kematian yang sangat besar adalah karang keras dari Genera Acropora dan Pocillopora. Pemutihan karang yang disertai dengan tingkat kematian karang yang tinggi telah menyebabkan penurunan tutupan karang keras di Perairan Utara Aceh secara signifikan bahkan di beberapa tempat tutupan karang dari Genera Acropora mengalami kematian sebesar 100%. Selain berdampak kepada penurunan tutupan karang keras, pemutihan karang pada tahun 2010 juga berdampak pada penurunan kelimpahan ikan karang terutama ikan karang pemakan polip karang (Corallivore) yang mengalami penurunan kelimpahan secara signifikan antara tahun 2009 dengan 2011 dan 2013. Data tersebut bisa disimpulkan bahwa, pemutihan karang pada tahun 2010 di Perairan Utara Aceh merupakan peristiwa yang paling parah yang pernah dilaporkan di Indonesia khususnya di Utara Aceh.A drastic increasing in Sea Surface Temperature (SST) was happened in Andaman Sea including in Aceh region from April through end of May 2010. The recent escalations of SST have caused mass coral bleaching event in many places in the world including northern Aceh water of Indonesia. Bleaching survey was conducted in Northern Aceh to measure ecological impact of bleaching including bleaching index, coral cover and reef fish abundance. More than 35% bleached coral were died, with tremendous mortality of susceptible genera such as Acropora and Pocillopora. Coral bleaching has impact in declining coral cover in Northern Aceh significantly after coral bleaching and the evidence of loss Acropora in some area. Coral bleaching also impact to coral fishes, where fishes abundance especially coralivorous fishes has declining significantly betwen 2009 and 2011 also 2013. The 2010 bleaching event is one of the most severe events reported for Indonesia including in Northern Aceh

STATUS PEMANFAATAN IKAN KAKAP (Lutjanus spp.) BERBASIS DATA PANJANG IKAN DI PERAIRAN TAMAN NASIONAL TAKA BONERATE

Snappers (Lutjanus spp.) are the most common reef fish caught in Taka Bonerate National Park due to its high economic value and primarily targeted species. Without proper management measures, intensive fishing activities might result in unsustainable fish stocks.  Therefore, in order to maintain sustainable utilization, it is important to understand the stock status of snapper fisheries. This study aimed to analyze the snappers' stock status in Taka Bonerate National Park's waters. Data were collected from January to December 2022 at three small-scale fisheries landing sites. The results showed that snappers are classified as slow-growing species with growth rates for species L. bohar, L. quinquelineatus, L. gibbus respectively 0,12, 0,39, and 0,35 per year to reach their respective asymptotic lengths of 83,41 cm, 29,5 cm, and 46,80 cm. The stock status of L. gibbus and L. bohar were indicated at overfished status where the exploitation rate (E) was > 0.5 and the SPR was < 0.3,  hence a proper management measures is required. Furthermore, the species of L. quinquelineatus has a value of E is 0.5 and SPR is at 0.3, indicating that the utilization level of this species was at an optimal level. Keywords:       Snapper, Taka Bonerate, Fisheries Management

BIODIVERSITAS IKAN KARANG DI WILAYAH BENTANG LAUT LESSER SUNDA BANDA (KAB. FLORES TIMUR, ALOR DAN MALUKU BARAT DAYA), INDONESIA

Sebanyak 62 titik penyelaman dilakukan untuk memberi gambaran mengenai ikan karang yang terdapat di wilayah perbatasan Propinsi NTT dan Maluku di Indonesia. Tutupan karang hidup menunjukan umumnya kondisi tutupan karang berada pada kategori baik dengan nilai rata-rata 62,51%. Ikan karang yang ditemukan dalam survei ini terdiri dari 468 spesies dalam 47 Famili ikan karang dimana biomassa ikan karang tertinggi terdapat Kab. MBD (Rata-rata 12.476,32 Kg/Ha) sedangkan yang terendah terdapat di Kab. Flores Timur (rata-rata 652,83 Kg/Ha). Nilai Kelimpahan ikan karang tertinggi terdapat di Kab. MBD (rata-rata 13.308 Ind/Ha) dan yang terendah terdapat di Kab. Flores Timur (rata-rata 1.502.23 Ind/Ha). Struktur komunitas ikan karang berdasarkan indeks shanon-weinner (H’) berada kategori sedang, nilai indeks keseragaman (E) masuk kategori labil dan nilai dominansi (C) masuk dominansi rendah sehingga ekosistem masih dalam kondisi baik. Kesamaan spesies ikan karang menggunakan hasil cluster analysis pada taraf penskalaan 66,37 % dan MDS (Multi Dimensional Scalling) mengelompokkan ikan karang kedalam 2 grup yaitu ikan karang di wilayah Kab. Alor dan Flores Timur dan Kabupaten Maluku Barat Daya di kolompok lainnya. Hasil dari analisis klatser dan MDS memperlihatkan Kab. Alor dan Flores timur di Provinsi NTT yang masuk wilayah geografis Lesser Sunda memiliki perbedaan ikan karang dengan Kab. Maluku Barat Daya di Provinsi Maluku yang secara geografis masuk area Banda seascapes. Secara keseluruhan ikan karang di Kab. MBD memiliki potensi yang sangat tinggi dilihat dari kelimpahan, biomasa dan nilai ekologi lainnya. Lokasi ini bisa dikembangkan menjadi sumber protein hewani yang potensial bagi masyarakat disana maupun tingkat nasional.Kata kunci: Ikan karang, Biomassa, kelimpahan, Lesser sunda, Flores Timur, Alor, Maluku Barat Daya. REEF FISHES BIODIVERSITY OF LESSER SUNDA-BANDA SEASCAPE (EAST FLORES, ALOR AND SOUTH WEST MALUKU DISTRICT) IN INDONESIAABSTRACT A total of 62 dive sites were made to provide an overview of reef fish found in the border region of the Province of NTT and Maluku in Indonesia. Live coral cover shows the general condition of the coral cover is in good category with an average value of 62.51%. Reef fish found in this survey consists of 468 species in 47 Famili reef fish reef where fish biomass is highest Kab. MBD (average 12.476,32 kg.ha-1), while the lowest was in the district. East Flores (an average of 652,83 kg.ha-1). The value of reef fish abundance is highest in the district MBD (average 13.308 ind.ha-1) and the lowest was in the district East Flores (average 1.502,23 ind.ha-1). Reef fish community structure based-weinner Shannon index (H') was the medium category, evenness indice value (E) in the category volatile and the value of dominance (C) enters a low dominance so that the ecosystem is still in good condition. The similarity of species of reef fish using cluster analysis results at the level of scaling 66.37% and MDS (Multi Dimensional Scaling) breaks down into two groups of reef fish that reef fish in the district Alor and East Florest and district of Southwest Maluku in other group. Results of the cluster analysis and MDS showed Alor and East Flores regency in NTT Prvince incoming Lesser Sunda seascapes have different reef fish by the District of Southwest Maluku in Maluku Province incoming Sunda Banda seascapes. Overall reef fish in the district. MBD has a very high potential views of abundance, biomass and other ecological values. This location can be developed into a potential source of animal protein for the people there as well as national level. Keywords: Reef fishes, biomass, abundance, Lesser Sunda, sunda banda seascap

BIODIVERSITAS IKAN KARANG DI WILAYAH BENTANG LAUT LESSER SUNDA BANDA (KAB. FLORES TIMUR, ALOR DAN MALUKU BARAT DAYA), INDONESIA

Sebanyak 62 titik penyelaman dilakukan untuk memberi gambaran mengenai ikan karang yang terdapat di wilayah perbatasan Propinsi NTT dan Maluku di Indonesia. Tutupan karang hidup menunjukan umumnya kondisi tutupan karang berada pada kategori baik dengan nilai rata-rata 62,51%. Ikan karang yang ditemukan dalam survei ini terdiri dari 468 spesies dalam 47 Famili ikan karang dimana biomassa ikan karang tertinggi terdapat Kab. MBD (Rata-rata 12.476,32 Kg/Ha) sedangkan yang terendah terdapat di Kab. Flores Timur (rata-rata 652,83 Kg/Ha). Nilai Kelimpahan ikan karang tertinggi terdapat di Kab. MBD (rata-rata 13.308 Ind/Ha) dan yang terendah terdapat di Kab. Flores Timur (rata-rata 1.502.23 Ind/Ha). Struktur komunitas ikan karang berdasarkan indeks shanon-weinner (H’) berada kategori sedang, nilai indeks keseragaman (E) masuk kategori labil dan nilai dominansi (C) masuk dominansi rendah sehingga ekosistem masih dalam kondisi baik. Kesamaan spesies ikan karang menggunakan hasil cluster analysis pada taraf penskalaan 66,37 % dan MDS (Multi Dimensional Scalling) mengelompokkan ikan karang kedalam 2 grup yaitu ikan karang di wilayah Kab. Alor dan Flores Timur dan Kabupaten Maluku Barat Daya di kolompok lainnya. Hasil dari analisis klatser dan MDS memperlihatkan Kab. Alor dan Flores timur di Provinsi NTT yang masuk wilayah geografis Lesser Sunda memiliki perbedaan ikan karang dengan Kab. Maluku Barat Daya di Provinsi Maluku yang secara geografis masuk area Banda seascapes. Secara keseluruhan ikan karang di Kab. MBD memiliki potensi yang sangat tinggi dilihat dari kelimpahan, biomasa dan nilai ekologi lainnya. Lokasi ini bisa dikembangkan menjadi sumber protein hewani yang potensial bagi masyarakat disana maupun tingkat nasional.Kata kunci: Ikan karang, Biomassa, kelimpahan, Lesser sunda, Flores Timur, Alor, Maluku Barat Daya. REEF FISHES BIODIVERSITY OF LESSER SUNDA-BANDA SEASCAPE (EAST FLORES, ALOR AND SOUTH WEST MALUKU DISTRICT) IN INDONESIAABSTRACT A total of 62 dive sites were made to provide an overview of reef fish found in the border region of the Province of NTT and Maluku in Indonesia. Live coral cover shows the general condition of the coral cover is in good category with an average value of 62.51%. Reef fish found in this survey consists of 468 species in 47 Famili reef fish reef where fish biomass is highest Kab. MBD (average 12.476,32 kg.ha-1), while the lowest was in the district. East Flores (an average of 652,83 kg.ha-1). The value of reef fish abundance is highest in the district MBD (average 13.308 ind.ha-1) and the lowest was in the district East Flores (average 1.502,23 ind.ha-1). Reef fish community structure based-weinner Shannon index (H') was the medium category, evenness indice value (E) in the category volatile and the value of dominance (C) enters a low dominance so that the ecosystem is still in good condition. The similarity of species of reef fish using cluster analysis results at the level of scaling 66.37% and MDS (Multi Dimensional Scaling) breaks down into two groups of reef fish that reef fish in the district Alor and East Florest and district of Southwest Maluku in other group. Results of the cluster analysis and MDS showed Alor and East Flores regency in NTT Prvince incoming Lesser Sunda seascapes have different reef fish by the District of Southwest Maluku in Maluku Province incoming Sunda Banda seascapes. Overall reef fish in the district. MBD has a very high potential views of abundance, biomass and other ecological values. This location can be developed into a potential source of animal protein for the people there as well as national level. Keywords: Reef fishes, biomass, abundance, Lesser Sunda, sunda banda seascape</p

BioTIME:a database of biodiversity time series for the Anthropocene

Motivation: The BioTIME database contains raw data on species identities and abundances in ecological assemblages through time. These data enable users to calculate temporal trends in biodiversity within and amongst assemblages using a broad range of metrics. BioTIME is being developed as a community led open-source database of biodiversity time series. Our goal is to accelerate and facilitate quantitative analysis of temporal patterns of biodiversity in the Anthropocene.Main types of variables included: The database contains 8,777,413 species abundance records, from assemblages consistently sampled for a minimum of two, which need not necessarily be consecutive. In addition, the database contains metadata relating to sampling methodology andcontextual information about each record.Spatial location and grain: BioTIME is a global database of 547,161 unique sampling locations spanning the marine, freshwater and terrestrial realms. Grain size varies across datasets from 0.0000000158 km2 (158 cm2) to 100 km2 (1 000 000 000 000 cm2).Time period and grain: BioTIME records span from 1874 to 2016. The minimum temporal grain across all datasets in BioTIME is year.Major taxa and level of measurement: BioTIME includes data from 44,440 species across the plant and animal kingdoms, ranging from plants, plankton, and terrestrial invertebrates to small and large vertebrates.Software format: .csv and .SQ

Are rare species useful species? Obstacles to the conservation of tree diversity in the dry forest zone agro-ecosystems of Mesoamerica

Aim To test the potential to conserve rare dry forest tree and shrub species circa situm.Location Oaxaca, Mexico and Southern Honduras.Methods Local uses (timber, posts and firewood) of species were determined principally through semistructured interviews with 20 rural householders in each of four communities in Honduras and four in Oaxaca. Tree and shrub diversity inventories were carried out in a total of 227 forest patches and parcels of farmland in those eight communities. Species’ conservation priorities were determined using the star system of Hawthorne (1996) and IUCN listings.Results Despite a large number of useful species, remarkably few were also conservation priorities. Useful species were found to be substitutable as is illustrated by Bombacopsis quinata, Cordia alliodora, Guaiacum sanctum and G. coulteri.Conclusions In these areas, circa situm conservation is inhibited by the lack of species that are both rare and useful. Usefulness must be interpreted as a function of substitutability. Natural regeneration provides an abundance of diversity, farmers are unlikely to invest in the management of a species when suitable substitutes are freely available. The key to conserving rare species may be in maintaining or enhancing the value of the landscape elements in which they are found

BioTIME:a database of biodiversity time series for the Anthropocene

Abstract Motivation: The BioTIME database contains raw data on species identities and abundances in ecological assemblages through time. These data enable users to calculate temporal trends in biodiversity within and amongst assemblages using a broad range of metrics. BioTIME is being developed as a community‐led open‐source database of biodiversity time series. Our goal is to accelerate and facilitate quantitative analysis of temporal patterns of biodiversity in the Anthropocene. Main types of variables included: The database contains 8,777,413 species abundance records, from assemblages consistently sampled for a minimum of 2 years, which need not necessarily be consecutive. In addition, the database contains metadata relating to sampling methodology and contextual information about each record. Spatial location and grain: BioTIME is a global database of 547,161 unique sampling locations spanning the marine, freshwater and terrestrial realms. Grain size varies across datasets from 0.0000000158 km² (158 cm²) to 100 km² (1,000,000,000,000 cm²). Time period and grain: BioTIME records span from 1874 to 2016. The minimal temporal grain across all datasets in BioTIME is a year. Major taxa and level of measurement: BioTIME includes data from 44,440 species across the plant and animal kingdoms, ranging from plants, plankton and terrestrial invertebrates to small and large vertebrates. Software format: .csv and .SQL