21 research outputs found
A gentle introduction to the functional renormalization group: the Kondo effect in quantum dots
The functional renormalization group provides an efficient description of the
interplay and competition of correlations on different energy scales in
interacting Fermi systems. An exact hierarchy of flow equations yields the
gradual evolution from a microscopic model Hamiltonian to the effective action
as a function of a continuously decreasing energy cutoff. Practical
implementations rely on suitable truncations of the hierarchy, which capture
nonuniversal properties at higher energy scales in addition to the universal
low-energy asymptotics. As a specific example we study transport properties
through a single-level quantum dot coupled to Fermi liquid leads. In
particular, we focus on the temperature T=0 gate voltage dependence of the
linear conductance. A comparison with exact results shows that the functional
renormalization group approach captures the broad resonance plateau as well as
the emergence of the Kondo scale. It can be easily extended to more complex
setups of quantum dots.Comment: contribution to Les Houches proceedings 2006, Springer styl
Kondo effect in coupled quantum dots: a Non-crossing approximation study
The out-of-equilibrium transport properties of a double quantum dot system in
the Kondo regime are studied theoretically by means of a two-impurity Anderson
Hamiltonian with inter-impurity hopping. The Hamiltonian, formulated in
slave-boson language, is solved by means of a generalization of the
non-crossing approximation (NCA) to the present problem. We provide benchmark
calculations of the predictions of the NCA for the linear and nonlinear
transport properties of coupled quantum dots in the Kondo regime. We give a
series of predictions that can be observed experimentally in linear and
nonlinear transport measurements through coupled quantum dots. Importantly, it
is demonstrated that measurements of the differential conductance , for the appropriate values of voltages and inter-dot tunneling
couplings, can give a direct observation of the coherent superposition between
the many-body Kondo states of each dot. This coherence can be also detected in
the linear transport through the system: the curve linear conductance vs
temperature is non-monotonic, with a maximum at a temperature
characterizing quantum coherence between both Kondo states.Comment: 20 pages, 17 figure
Inferring Binding Energies from Selected Binding Sites
We employ a biophysical model that accounts for the non-linear relationship between binding energy and the statistics of selected binding sites. The model includes the chemical potential of the transcription factor, non-specific binding affinity of the protein for DNA, as well as sequence-specific parameters that may include non-independent contributions of bases to the interaction. We obtain maximum likelihood estimates for all of the parameters and compare the results to standard probabilistic methods of parameter estimation. On simulated data, where the true energy model is known and samples are generated with a variety of parameter values, we show that our method returns much more accurate estimates of the true parameters and much better predictions of the selected binding site distributions. We also introduce a new high-throughput SELEX (HT-SELEX) procedure to determine the binding specificity of a transcription factor in which the initial randomized library and the selected sites are sequenced with next generation methods that return hundreds of thousands of sites. We show that after a single round of selection our method can estimate binding parameters that give very good fits to the selected site distributions, much better than standard motif identification algorithms