1,355 research outputs found
Pallet Management System: A Study of the Implementation of UID/RFID Technology for Tracking Shipping Materials within the Department of Defense Distribution Network
Sponsored Report (for Acquisition Research Program)The purpose of this MBA project is to identify the typical pallet utilization for the Defense Distribution Depot San Joaquin (DDJC) shipments to the Defense Distribution Depot San Diego (DDDC). That information will be used as the basis for suggesting a standardized reutilization management system for wood and non-wood pallets. This project will analyze the inclusion of Radio Frequency Identification and Unique Item Identification in conjunction with bar code technology for the improvement of asset visibility within the Department of Defense''s supply network.Naval Postgraduate School Acquisition Research ProgramApproved for public release; distribution is unlimited
Methodology to demonstrate pile capacity In relaxing ground
Driven pre-stressed concrete piles have been used as a foundation system to support abutments and
piers of a bridge constructed near Ballina in New South Wales, Australia. In order to achieve the required
geotechnical capacity, the piles were required to be driven through soft clay and sand to moderately weathered
rock. Pile Driving Analyser (PDA) testing together with CAPWAP analysis was performed to assess the
integrity and geotechnical capacity of the driven piles. Pile damage was observed during driving. To prevent
damage a rock shoe was retrofitted to the piles prior to installation. Reductions in pile capacity (or relaxation)
were observed between end of drive (EOD) and later restrike testing (RST). A substantial amount of additional
pile testing was performed at different times after driving to assess the changes in pile capacity over time. Most
piles were re-driven to achieve higher capacity. Pile capacity could not be achieved in one pier and additional
piles were installed to reduce the required pile test loa
Comparison of and Quasielastic Scattering
We formulate -nucleus quasielastic scattering in a manner which closely
parallels standard treatments of -nucleus quasielastic scattering. For
scattering, new responses involving scalar contributions appear in
addition to the Coulomb (or longitudinal) and transverse responses
which are of vector character. We compute these responses using both nuclear
matter and finite nucleus versions of the Relativistic Hartree Approximation to
Quantum Hadrodynamics including RPA correlations. Overall agreement with
measured responses and new quasielastic scattering data for
Ca at |\qs|=500 MeV/c is good. Strong RPA quenching is essential for
agreement with the Coulomb response. This quenching is notably less for the
cross section even though the new scalar contributions are even more
strongly quenched than the vector contributions. We show that this
``differential quenching'' alters sensitive cancellations in the expression for
the cross section so that it is reduced much less than the individual
responses. We emphasize the role of the purely relativistic distinction between
vector and scalar contributions in obtaining an accurate and consistent
description of the and data within the framework of our nuclear
structure model.Comment: 26 pages, 5 uuencoded figures appended to end of this fil
3-Fluoro-4-hydroxyprolines:Synthesis, conformational analysis and stereoselective recognition by the VHL E3 ubiquitin ligase for targeted protein degradation
Hydroxylation and
fluorination of proline alters the pyrrolidine
ring pucker and the trans:cis amide bond ratio in a stereochemistry-dependent
fashion, affecting molecular recognition of proline-containing molecules
by biological systems. While hydroxyprolines and fluoroprolines are
common motifs in medicinal and biological chemistry, the synthesis
and molecular properties of prolines containing both modifications,
i.e., fluoro-hydroxyprolines, have not been described. Here we present
a practical and facile synthesis of all four diastereoisomers of 3-fluoro-4-hydroxyprolines
(F-Hyps), starting from readily available 4-oxo-l-proline
derivatives. Small-molecule X-ray crystallography, NMR spectroscopy,
and quantum mechanical calculations are consistent with fluorination
at C<sup>3</sup> having negligible effects on the hydrogen bond donor
capacity of the C<sup>4</sup> hydroxyl, but inverting the natural
preference of Hyp from C<sup>4</sup>-exo to C<sup>4</sup>-endo pucker.
In spite of this, F-Hyps still bind to the von Hippel–Lindau
(VHL) E3 ligase, which naturally recognizes C<sup>4</sup>-exo Hyp
in a stereoselective fashion. Co-crystal structures and electrostatic
potential calculations support and rationalize the observed preferential
recognition for (3<i>R</i>,4<i>S</i>)-F-Hyp over
the corresponding (3<i>S</i>,4<i>S</i>) epimer
by VHL. We show that (3<i>R</i>,4<i>S</i>)-F-Hyp
provides bioisosteric Hyp substitution in both hypoxia-inducible factor
1 alpha (HIF-1α) substrate peptides and peptidomimetic ligands
that form part of PROTAC (proteolysis targeting chimera) conjugates
for targeted protein degradation. Despite a weakened affinity, Hyp
substitution with (3<i>S</i>,4<i>S</i>)-F-Hyp
within the PROTAC MZ1 led to Brd4-selective cellular degradation at
concentrations >100-fold lower than the binary <i>K</i><sub>d</sub> for VHL. We anticipate that the disclosed chemistry
of 3-fluoro-4-hydroxyprolines
and their application as VHL ligands for targeted protein degradation
will be of wide interest to medicinal organic chemists, chemical biologists,
and drug discoverers alike
Development of tumor mutation burden as an immunotherapy biomarker: utility for the oncology clinic.
Treatment with immune checkpoint blockade (ICB) with agents such as anti-programmed cell death protein 1 (PD-1), anti-programmed death-ligand 1 (PD-L1), and/or anti-cytotoxic T-lymphocyte-associated protein 4 (CTLA-4) can result in impressive response rates and durable disease remission but only in a subset of patients with cancer. Expression of PD-L1 has demonstrated utility in selecting patients for response to ICB and has proven to be an important biomarker for patient selection. Tumor mutation burden (TMB) is emerging as a potential biomarker. However, refinement of interpretation and contextualization is required.
In this review, we outline the evolution of TMB as a biomarker in oncology, delineate how TMB can be applied in the clinic, discuss current limitations as a diagnostic test, and highlight mechanistic insights unveiled by the study of TMB. We review available data to date studying TMB as a biomarker for response to ICB by tumor type, focusing on studies proposing a threshold for TMB as a predictive biomarker for ICB activity.
High TMB consistently selects for benefit with ICB therapy. In lung, bladder and head and neck cancers, the current predictive TMB thresholds proposed approximate 200 non-synonymous somatic mutations by whole exome sequencing (WES). PD-L1 expression influences response to ICB in high TMB tumors with single agent PD-(L)1 antibodies; however, response may not be dependent on PD-L1 expression in the setting of anti-CTLA4 or anti-PD-1/CTLA-4 combination therapy. Disease-specific TMB thresholds for effective prediction of response in various other malignancies are not well established.
TMB, in concert with PD-L1 expression, has been demonstrated to be a useful biomarker for ICB selection across some cancer types; however, further prospective validation studies are required. TMB determination by selected targeted panels has been correlated with WES. Calibration and harmonization will be required for optimal utility and alignment across all platforms currently used internationally. Key challenges will need to be addressed before broader use in different tumor types
Universal Correlations of Coulomb Blockade Conductance Peaks and the Rotation Scaling in Quantum Dots
We show that the parametric correlations of the conductance peak amplitudes
of a chaotic or weakly disordered quantum dot in the Coulomb blockade regime
become universal upon an appropriate scaling of the parameter. We compute the
universal forms of this correlator for both cases of conserved and broken time
reversal symmetry. For a symmetric dot the correlator is independent of the
details in each lead such as the number of channels and their correlation. We
derive a new scaling, which we call the rotation scaling, that can be computed
directly from the dot's eigenfunction rotation rate or alternatively from the
conductance peak heights, and therefore does not require knowledge of the
spectrum of the dot. The relation of the rotation scaling to the level velocity
scaling is discussed. The exact analytic form of the conductance peak
correlator is derived at short distances. We also calculate the universal
distributions of the average level width velocity for various values of the
scaled parameter. The universality is illustrated in an Anderson model of a
disordered dot.Comment: 35 pages, RevTex, 6 Postscript figure
Restricted three body problems at the nanoscale
In this paper, we investigate some of the classical restricted three body
problems at the nanoscale, such as the circular planar restricted problem for
three C60 fullerenes, and a carbon atom and two C60 fullerenes. We model the
van der Waals forces between the fullerenes by the Lennard-Jones potential. In
particular, the pairwise potential energies between the carbon atoms on the
fullerenes are approximated by the continuous approach, so that the total
molecular energy between two fullerenes can be determined analytically. Since
we assume that such interactions between the molecules occur at sufficiently
large distance, the classical three body problems analysis is legitimate to
determine the collective angular velocity of the two and three C60 fullerenes
at the nanoscale. We find that the maximum angular frequency of the two and
three fullerenes systems reach the terahertz range and we determine the
stationary points and the points which have maximum velocity for the carbon
atom for the carbon atom and the two fullerenes system
Structure Formation, Melting, and the Optical Properties of Gold/DNA Nanocomposites: Effects of Relaxation Time
We present a model for structure formation, melting, and optical properties
of gold/DNA nanocomposites. These composites consist of a collection of gold
nanoparticles (of radius 50 nm or less) which are bound together by links made
up of DNA strands. In our structural model, the nanocomposite forms from a
series of Monte Carlo steps, each involving reaction-limited cluster-cluster
aggregation (RLCA) followed by dehybridization of the DNA links. These links
form with a probability which depends on temperature and particle
radius . The final structure depends on the number of monomers (i. e. gold
nanoparticles) , , and the relaxation time. At low temperature, the
model results in an RLCA cluster. But after a long enough relaxation time, the
nanocomposite reduces to a compact, non-fractal cluster. We calculate the
optical properties of the resulting aggregates using the Discrete Dipole
Approximation. Despite the restructuring, the melting transition (as seen in
the extinction coefficient at wavelength 520 nm) remains sharp, and the melting
temperature increases with increasing as found in our previous
percolation model. However, restructuring increases the corresponding link
fraction at melting to a value well above the percolation threshold. Our
calculated extinction cross section agrees qualitatively with experiments on
gold/DNA composites. It also shows a characteristic ``rebound effect,''
resulting from incomplete relaxation, which has also been seen in some
experiments. We discuss briefly how our results relate to a possible sol-gel
transition in these aggregates.Comment: 12 pages, 10 figure
Effect of tensor couplings in a relativistic Hartree approach for finite nuclei
The relativistic Hartree approach describing the bound states of both
nucleons and anti-nucleons in finite nuclei has been extended to include tensor
couplings for the - and -meson. After readjusting the parameters
of the model to the properties of spherical nuclei, the effect of
tensor-coupling terms rises the spin-orbit force by a factor of 2, while a
large effective nucleon mass sustains. The overall
nucleon spectra of shell-model states are improved evidently. The predicted
anti-nucleon spectra in the vacuum are deepened about 20 -- 30 MeV.Comment: 31 pages, 4 postscript figures include
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