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20 research outputs found
Cellular deconvolution of GTEx tissues powers discovery of disease and cell-type associated regulatory variants
Author
A Butler
A Crinier
+36 more
AD Panopoulos
AM Newman
B Fan
C Giambartolomei
C Tabula Muris
CA Glastonbury
E Shapiro
G Lapouge
GT Consortium
HJ Westra
IY Song
JB Cheng
JJ Chan
JV Gruber
K Alasoo
LA Applegate
M Baron
MD Young
MR Kamstrup
NI Panousis
OA Balbin
QH Nguyen
RJ Morris
S Durinck
S Durinck
SA MacParland
SY Kim
T Hagai
T Tabib
V Ratushny
X Dong
XP Jiang
Y Chen
Y Yan
Y Zhong
Z Jian
Publication venue
'Springer Science and Business Media LLC'
Publication date
Field of study
No full text
Crossref
Structural cells are key regulators of organ-specific immune responses
Author
A Bergthaler
A Lercher
+41 more
AC Villani
AI Su
AL Haber
B Li
C Bock
C Gustafsson
C Perez-Shibayama
C Schmidl
CD Buckley
CF Guerrero-Juarez
D Malhotra
DD Pinschewer
DT Montoro
F Mizoguchi
H Baazim
J Kinchen
JA Ramilowski
JD Buenrostro
JS Pober
K Parikh
KE Kouadjo
KS Yan
LB Rodda
LW Plasschaert
M Humbert
ME Kotas
MM Davis
MR Corces
R Ahmed
R Nowarski
R Vento-Tormo
RP Schleimer
S Picelli
S Saluzzo
SJ Turley
T Krausgruber
T Shay
The Tabula Muris Consortium
X Han
Y Lavin
Y Wang
Publication venue
'Springer Science and Business Media LLC'
Publication date
Field of study
No full text
Crossref
Using the Allen gene expression atlas of the adult mouse brain to gain further insight into the physiological significance of TAG-1/Contactin-2
Author
A Lieberoth
A Zaldivar
+55 more
AJ Furley
D Karagogeos
D Karagogeos
D Pinatel
D Xenaki
E Chatzopoulou
E Gascon
E Stogmann
ES Lein
ET Stoeckli
G Gennarini
J Dodd
JB Levy
JS Brakeman
K Kalafatakis
K Kasahara
K Kyriakopoulou
L Ng
L Zhou
L Zoupi
L Zoupi
M Buttiglione
M Denaxa
M Denaxa
M Denaxa
M Iijima
M Jenkinson
M Koenning
M Okamoto
M Savvaki
M Savvaki
M Traka
M Traka
M Yamamoto
MM Paz Soldán
N Tachi
P Milev
PH Kuhn
QH Ma
RD Fields
S Poliak
SA Austin
SP Fancy
T Brümmendorf
T Derfuss
T Masuda
T Masuda
T Namba
T Theodosiou
Tabula Muris Consortium
V Gautam
W Wang
Y Bailly
Y Hadas
Y Yan
Publication venue
'Springer Science and Business Media LLC'
Publication date
Field of study
No full text
Crossref
Systematic assessment of tissue dissociation and storage biases in single-cell and single-nucleus RNA-seq workflows
Author
A Butler
A Dobin
+41 more
A Guillaumet-Adkins
A Rohrwasser
AM Klein
ATL Lun
BB Lake
BB Lake
BV North
CT Wohnhaas
DJ McCarthy
ED O'Sullivan
EZ Macosko
GX Zheng
H Li
H Wu
I Korsunsky
I Tirosh
J Alles
J Cao
J Chen
J Chen
J Park
JC Martin
JZ Clark
M Adam
M Baron
M Hochane
MD Robinson
N Aizarani
N Karaiskos
R Hou
S Yang
SC van den Brink
SR Krishnaswami
SS Potter
SV Puram
SW Lukowski
T Lassmann
Tabula Muris Consortium
TE Bakken
Y Benjamini
Y Liao
Publication venue
'Springer Science and Business Media LLC'
Publication date
Field of study
No full text
Crossref
Single-cell transcriptomics identifies CD44 as a marker and regulator of endothelial to haematopoietic transition
Author
A Aruffo
A Avigdor
+49 more
A Batsivari
A Ciau-Uitz
A Ditadi
A Medvinsky
AC Nascimbeni
AC Zovein
C Dall’Armi
C Lancrin
C Lancrin
C Liu
CS Baron
E Afgan
E Oberlin
F Zhou
G Swiers
I Pastushenko
J Cao
J-C Boisset
JI Lopez
JY Bertrand
K Kissa
K Phadwal
K Wilhelm
L Du
M Mortensen
M Quintero
M Shvartsman
ME Prince
MFTR de Bruijn
N Mizushima
R Lis
R Patro
R Schmits
R Sugimura
R Thambyrajah
S Nedvetzki
S Pearson
S Picelli
S Rybtsov
S Rybtsov
S Takaishi
SM Watt
T Riffelmacher
T Yokomizo
Tabula Muris Consortium
TM Schmitt
TT Ho
X Tan
X Yu
Publication venue
'Springer Science and Business Media LLC'
Publication date
Field of study
No full text
Crossref
scAlign: a tool for alignment, integration, and rare cell identification from scRNA-seq data
Author
A Butler
A Dixit
+43 more
A Eldar
A McDavid
A Subramanian
AK Shalek
Asaf Poran
C Bancells
C Trapnell
C Trapnell
C-C Hon
D Risso
DA Jaitin
F Buettner
F Rohart
G Finak
Gerald Quon
H Maamar
JD Welch
Jeffrey R. Moffitt
L Haghverdi
L van der Maaten
LW Plasschaert
M Büttner
M Setty
MI Love
MJ Muraro
MS Kowalczyk
N Lawlor
Nelson Johansen
P Datlinger
P Haeusser
P Haeusser
R Lopez
R Vento-Tormo
SC Hicks
T Stuart
Tabula Muris Consortium
VY Kiselev
VY Kiselev
X Glorot
X Qiu
Zhicheng Ji
Zhicheng Ji
Å Segerstolpe
Publication venue
'Springer Science and Business Media LLC'
Publication date
Field of study
No full text
Crossref
Context specificity of the EMT transcriptional response
Author
A Butler
A Dongre
+55 more
A Dongre
A Lecharpentier
A Liberzon
AJ Armstrong
AM Bolger
AM McCorry
AN Schep
B Langmead
C Kröger
C Larocca
C Scheel
C Ward
C-Z Li
CS McGinnis
D Lambrechts
DR Principe
F Bocci
G Tarcic
H Kasai
H-W Yeh
J Holian
J-M Hou
JD Buenrostro
JL McFaline-Figueroa
K Gondkar
L Bakiri
L Li
L Su
L Xie
L Yao
LD Osborne
M Cieślik
MA Huber
MA Nieto
MP Kumar
N Dalmau
N Tiwari
NM Aiello
P Peixoto
PA Gregory
R Derynck
R Dong
R Limame
RM Gemmill
S Aibar
SV Puram
T Suzuki
T Yonekawa
Tabula Muris Consortium.
V Devaraj
W Yu
WS Chen
Y Sun
Y Zhang
Z Lu
Publication venue
'Springer Science and Business Media LLC'
Publication date
Field of study
No full text
Crossref
Profiling of the plasma proteome across different stages of human heart failure
Author
A Jagodzinski
A Liberzon
+58 more
A Lourdusamy
A Martinsson
A Subramanian
AF Di Narzo
AP Papageorgiou
AR Pinto
B Furie
B Schroen
BB Sun
C Herder
C Reactive Protein Coronary Heart Disease Genetics Collaboration.
D Ngo
D Ricklin
DL Mann
E Braunwald
GS Omenn
GTEx Consortium.
J Candia
J Stehlik
JE Ho
JG Smith
JG Smith
JG Smith
JG Smith
JG Smith
JG Smith
JR Staley
K Suhre
K Swedberg
KG Aragam
L Adamo
L Gold
M Ashburner
M Clamp
M Jessup
M Kallikourdis
M Swinnen
M Uhlen
MD Benson
MH Chen
N Natarajan
N Shahini
NC Onland-Moret
NL Anderson
P Bornstein
PL Stahl
S Doll
S Homma
S Sanada
SJ Sharp
T Farrah
Tabula Muris Consortium.
TE Mollnes
TJ Wang
V Emilsson
VL Roger
WE Barlow
Y Benjamini
Publication venue
'Springer Science and Business Media LLC'
Publication date
Field of study
No full text
Crossref
Sierra: discovery of differential transcript usage from polyA-captured single-cell RNA-seq data
Author
A Dobin
A Schaub
+47 more
AA Dillman
AM Bolger
AM Givel
AM Lambeir
B Tian
C Laguri
C Mayr
D Lukacsovich
DP Vanichkina
F Chang
FE Baralle
G Ding
G Finak
G La Manno
GA Quaife-Ryan
H Chen
H Dvinge
H Jung
H Wickham
HJ Park
JD Welch
JJ-L Wong
JJH Chong
K Yap
M Lawrence
MM Scotti
N Farbehi
P Rueda
Q Pan
R Elkon
R Janssens
R Middleton
R Sandberg
R Torres
R Wang
RC Gentleman
S Anders
S-H Lee
SE Iismaa
T Stuart
The Tabula Muris Consortium
X Fu
X Qiu
Y Huang
Y Song
Z Huang
Á Arzalluz-Luque
Publication venue
'Springer Science and Business Media LLC'
Publication date
Field of study
No full text
Crossref
The murine Microenvironment Cell Population counter method to estimate abundance of tissue-infiltrating immune and stromal cell populations in murine samples using gene expression
Author
A Alitalo
A Costa
+54 more
AM Newman
AM Newman
Aurélien de Reyniès
BH Lee
BS Desai
Catherine Sautès-Fridman
Cheng-Ming Sun
Christophe Linhard
D Gate
D Metcalf
David Tavel
DS Chen
DV Hansen
E Becht
E Gjoneska
Etienne Becht
F Finotello
F Finotello
F Petitprez
F Vallania
Florent Petitprez
G Sturm
H Sugimoto
H Yoshida
I Papatheodorou
I Tindemans
J Choi
J DeVoss
J Folkman
J Tang
JC Cruz
JC Kips
KG Elpek
KY Lin
Lubka T. Roumenina
Maxime Meylan
Mira Ayadi
MN McCall
Nabila Elarouci
R Kalluri
RM Zemek
S Lê
Sacha Levy
Tabula Muris Consortium
TSP Heng
V Jojic
WE Johnson
WH Fridman
WH Fridman
Wolf H. Fridman
Z Altboum
Z Chen
Z Gu
Z Gu
Publication venue
'Springer Science and Business Media LLC'
Publication date
Field of study
No full text
Crossref
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