Genetic mapping of a barley leaf rust resistance gene Rph26 introgressed from Hordeum bulbosum

Key message: The quantitative barley leaf rust resistance gene, Rph26, was fine mapped within a H. bulbosum introgression on barley chromosome 1HL. This provides the tools for pyramiding with other resistance genes. Abstract: A novel quantitative resistance gene, Rph26, effective against barley leaf rust (Puccinia hordei) was introgressed from Hordeum bulbosum into the barley (Hordeum vulgare) cultivar ‘Emir’. The effect of Rph26 was to reduce the observed symptoms of leaf rust infection (uredinium number and infection type). In addition, this resistance also increased the fungal latency period and reduced the fungal biomass within infected leaves. The resulting introgression line 200A12, containing Rph26, was backcrossed to its barley parental cultivar ‘Emir’ to create an F₂ population focused on detecting interspecific recombination within the introgressed segment. A total of 1368 individuals from this F₂ population were genotyped with flanking markers at either end of the 1HL introgression, resulting in the identification of 19 genotypes, which had undergone interspecific recombination within the original introgression. F₃ seeds that were homozygous for the introgressions of reduced size were selected from each F₂ recombinant and were used for subsequent genotyping and phenotyping. Rph26 was genetically mapped to the proximal end of the introgressed segment located at the distal end of chromosome 1HL. Molecular markers closely linked to Rph26 were identified and will enable this disease resistance gene to be combined with other sources of quantitative resistance to maximize the effectiveness and durability of leaf rust resistance in barley breeding. Heterozygous genotypes containing a single copy of Rph26 had an intermediate phenotype when compared with the homozygous resistant and susceptible genotypes, indicating an incompletely dominant inheritance

Novel genes from wild barley hordeum spontaneum for barley improvement

Narrowing genetic basis is the bottleneck for modern plant improvement. Genetic variation in wild barley Hordeum spontaneum is much greater than that of either cultivated or landrace H. vulgare gene pool. It represents a valuable but underutilised gene pool for barley improvement as no biological isolation barriers exist between H. spontaneum and cultivated barley. Novel sources of new genes were identified from H. spontaneum for yield, quality, disease resistance and abiotic tolerance. Quantitative trait loci (QTLs) were mapped to all barley chromosomes. A QTL on chromosome 4H from the wild barley consistently increased yield by 7.7% across six test environments. Wild barley H. spontaneum was demonstrated as key genetic resource for drought and salinity tolerance. Two QTLs on chromosomes 2H and 5H increased grain yield by 12–22% under drought conditions. Several QTL clusters were present on chromosomes 1H, 2H, 4H, 6H and 7H from H. spontaneum for drought and salinity tolerance. Numerous candidate genes were identified to associate with tolerance to drought or salinity, and some of the candidate genes co-located with the QTLs for drought tolerance. QTLs/genes for resistance to powdery mildew, leaf rust and scald were mapped to all chromosomes. Scald resistance was found in at least five chromosome locations (1HS, 3H, 6HS, 7HL and 7HS) from H. spontaneum, and simple molecular markers were developed to accelerate transferring of these genes into cultivated barley. Novel beta-amylase allele from H. spontaneum was used to improve barley malting quality. Advanced backcross QTL provides an efficiency approach to transfer novel genes from H. spontaneum to cultivated barley